Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC012065.2-201ENST00000421295 375 ntBASIC3.55□□□□□ -1.84
VTNP04004 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.55□□□□□ -1.84
VTNP04004 AL593851.1-201ENST00000426171 157 ntBASIC3.55□□□□□ -1.84
VTNP04004 AL365396.1-201ENST00000430854 671 ntBASIC3.55□□□□□ -1.84
VTNP04004 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.55□□□□□ -1.84
VTNP04004 AL353705.1-201ENST00000433468 480 ntBASIC3.55□□□□□ -1.84
VTNP04004 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.55□□□□□ -1.84
VTNP04004 USP9YP35-201ENST00000435696 412 ntBASIC3.55□□□□□ -1.84
VTNP04004 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.55□□□□□ -1.84
VTNP04004 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.55□□□□□ -1.84
VTNP04004 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.55□□□□□ -1.84
VTNP04004 BET1P1-201ENST00000482276 359 ntBASIC3.55□□□□□ -1.84
VTNP04004 NCOR1P1-202ENST00000486162 291 ntBASIC3.55□□□□□ -1.84
VTNP04004 RPL7P47-201ENST00000497299 556 ntBASIC3.55□□□□□ -1.84
VTNP04004 AC020893.1-201ENST00000502452 580 ntBASIC3.55□□□□□ -1.84
VTNP04004 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.55□□□□□ -1.84
VTNP04004 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VTNP04004 MTCYBP37-201ENST00000510642 1133 ntBASIC3.55□□□□□ -1.84
VTNP04004 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.55□□□□□ -1.84
VTNP04004 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.55□□□□□ -1.84
VTNP04004 MRPS33P3-201ENST00000513456 322 ntBASIC3.55□□□□□ -1.84
VTNP04004 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.55□□□□□ -1.84
VTNP04004 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.55□□□□□ -1.84
VTNP04004 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
VTNP04004 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VTNP04004 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.55□□□□□ -1.84
VTNP04004 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.55□□□□□ -1.84
VTNP04004 AC092470.1-201ENST00000546187 132 ntBASIC3.55□□□□□ -1.84
VTNP04004 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.55□□□□□ -1.84
VTNP04004 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VTNP04004 AC110741.2-201ENST00000605278 268 ntBASIC3.55□□□□□ -1.84
VTNP04004 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.55□□□□□ -1.84
VTNP04004 AC100793.4-201ENST00000613683 429 ntBASIC3.55□□□□□ -1.84
VTNP04004 AC018692.3-201ENST00000623929 123 ntBASIC3.55□□□□□ -1.84
VTNP04004 AC231657.1-201ENST00000624313 397 ntBASIC3.55□□□□□ -1.84
VTNP04004 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VTNP04004 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.55□□□□□ -1.84
VTNP04004 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VTNP04004 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VTNP04004 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VTNP04004 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
VTNP04004 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VTNP04004 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VTNP04004 ZNF37BP-203ENST00000452306 1352 ntBASIC3.54□□□□□ -1.84
VTNP04004 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VTNP04004 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VTNP04004 RPS4XP5-202ENST00000449995 1334 ntBASIC3.54□□□□□ -1.84
VTNP04004 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.54□□□□□ -1.84
VTNP04004 XIAPP3-201ENST00000312918 795 ntBASIC3.54□□□□□ -1.84
VTNP04004 RNU6-1200P-201ENST00000384162 107 ntBASIC3.54□□□□□ -1.84
VTNP04004 RNU6-253P-201ENST00000384730 105 ntBASIC3.54□□□□□ -1.84
VTNP04004 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.54□□□□□ -1.84
VTNP04004 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.54□□□□□ -1.84
VTNP04004 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.54□□□□□ -1.84
VTNP04004 AC098592.1-201ENST00000419352 333 ntBASIC3.54□□□□□ -1.84
VTNP04004 BX890604.2-201ENST00000427883 474 ntBASIC3.54□□□□□ -1.84
VTNP04004 RPL23AP69-201ENST00000431134 458 ntBASIC3.54□□□□□ -1.84
VTNP04004 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VTNP04004 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.54□□□□□ -1.84
VTNP04004 RPL23AP16-201ENST00000441715 421 ntBASIC3.54□□□□□ -1.84
VTNP04004 MTCYBP11-201ENST00000447254 1109 ntBASIC3.54□□□□□ -1.84
VTNP04004 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.54□□□□□ -1.84
VTNP04004 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.54□□□□□ -1.84
VTNP04004 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.54□□□□□ -1.84
VTNP04004 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.54□□□□□ -1.84
VTNP04004 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VTNP04004 AC118465.1-201ENST00000513820 1271 ntBASIC3.54□□□□□ -1.84
VTNP04004 RNU6-1129P-201ENST00000515964 104 ntBASIC3.54□□□□□ -1.84
VTNP04004 AC105185.1-201ENST00000518705 535 ntBASIC3.54□□□□□ -1.84
VTNP04004 ZNF705CP-201ENST00000530515 889 ntBASIC3.54□□□□□ -1.84
VTNP04004 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.54□□□□□ -1.84
VTNP04004 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.54□□□□□ -1.84
VTNP04004 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.54□□□□□ -1.84
VTNP04004 AC008127.2-201ENST00000549925 1075 ntBASIC3.54□□□□□ -1.84
VTNP04004 SULT1C2P1-202ENST00000562418 459 ntBASIC3.54□□□□□ -1.84
VTNP04004 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.54□□□□□ -1.84
VTNP04004 MIR4999-201ENST00000585029 91 ntBASIC3.54□□□□□ -1.84
VTNP04004 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
VTNP04004 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.54□□□□□ -1.84
VTNP04004 AC106791.2-201ENST00000604680 391 ntBASIC3.54□□□□□ -1.84
VTNP04004 AL592221.1-201ENST00000605266 382 ntBASIC3.54□□□□□ -1.84
VTNP04004 HMGN2P28-201ENST00000606102 262 ntBASIC3.54□□□□□ -1.84
VTNP04004 AC245297.2-201ENST00000610119 565 ntBASIC3.54□□□□□ -1.84
VTNP04004 AC004908.3-201ENST00000610248 625 ntBASIC3.54□□□□□ -1.84
VTNP04004 AC092650.2-201ENST00000619984 902 ntBASIC3.54□□□□□ -1.84
VTNP04004 AC110801.1-201ENST00000623590 212 ntBASIC3.54□□□□□ -1.84
VTNP04004 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
VTNP04004 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
VTNP04004 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
VTNP04004 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
VTNP04004 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
VTNP04004 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VTNP04004 RPL23AP57-201ENST00000332361 466 ntBASIC3.53□□□□□ -1.84
VTNP04004 SNRPEP3-201ENST00000338402 276 ntBASIC3.53□□□□□ -1.84
VTNP04004 MIR422A-201ENST00000362286 90 ntBASIC3.53□□□□□ -1.84
VTNP04004 SNORA4.1-201ENST00000364263 144 ntBASIC3.53□□□□□ -1.84
VTNP04004 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.53□□□□□ -1.84
VTNP04004 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.53□□□□□ -1.84
VTNP04004 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.53□□□□□ -1.84
VTNP04004 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms