Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PTCD1O75127 HSPE1P11-201ENST00000339579 310 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PTCD1O75127 SNORA22B-201ENST00000383876 138 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 COX5BP7-201ENST00000414780 274 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCD1O75127 AC099336.2-201ENST00000422457 254 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCD1O75127 MED13P1-201ENST00000428342 171 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCD1O75127 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCD1O75127 AC099560.2-201ENST00000457554 255 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 RPL7L1P8-201ENST00000469911 741 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 AC027575.1-201ENST00000481064 460 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 NIP7P2-201ENST00000485801 544 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 AC068305.1-201ENST00000497406 726 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 HMGB1P21-201ENST00000502313 581 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 RNU6-1170P-201ENST00000515974 106 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 Y_RNA.665-201ENST00000516177 98 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCD1O75127 HMGB1P41-201ENST00000520234 440 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCD1O75127 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCD1O75127 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCD1O75127 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCD1O75127 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCD1O75127 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCD1O75127 LSM3P2-201ENST00000551246 273 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCD1O75127 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCD1O75127 AC040168.1-201ENST00000623594 991 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 AP000843.1-201ENST00000624880 701 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCD1O75127 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
PTCD1O75127 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 SMG1P6-201ENST00000532337 2930 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCD1O75127 AC004972.1-201ENST00000623934 2209 ntBASIC6.1□□□□□ -1.43
PTCD1O75127 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD1O75127 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCD1O75127 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD1O75127 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PTCD1O75127 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD1O75127 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PTCD1O75127 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD1O75127 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD1O75127 AC009643.2-201ENST00000603543 1448 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD1O75127 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD1O75127 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD1O75127 RNU6-552P-201ENST00000362869 119 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 RN7SKP227-201ENST00000364445 330 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 Y_RNA.452-201ENST00000384202 108 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 AC009302.1-201ENST00000417147 390 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 RPL17P36-201ENST00000420302 549 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCD1O75127 AL162591.2-201ENST00000449634 317 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 AC109327.1-201ENST00000471666 403 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 AC126389.1-201ENST00000477436 290 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 COX7A2P2-201ENST00000505291 250 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 AC116562.3-201ENST00000506136 177 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 AC016065.2-201ENST00000514530 444 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 RNU7-51P-201ENST00000516560 62 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 RNU6-1137P-201ENST00000517073 99 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCD1O75127 IGLVIV-53-201ENST00000520107 367 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 AC068587.5-201ENST00000528506 175 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCD1O75127 AC004817.2-201ENST00000561794 651 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCD1O75127 MIR3939-201ENST00000582614 106 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCD1O75127 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.09□□□□□ -1.43
PTCD1O75127 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD1O75127 OR56B2P-202ENST00000641377 2453 ntBASIC6.09□□□□□ -1.43
PTCD1O75127 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD1O75127 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.09□□□□□ -1.44
PTCD1O75127 Z95327.2-201ENST00000414579 1873 ntBASIC6.09□□□□□ -1.44
PTCD1O75127 AC093775.1-201ENST00000624154 1868 ntBASIC6.09□□□□□ -1.44
PTCD1O75127 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.09□□□□□ -1.44
PTCD1O75127 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTCD1O75127 AL138713.1-201ENST00000624026 2130 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 AC011978.2-201ENST00000569835 2054 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 AC244517.1-201ENST00000606030 2086 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD1O75127 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCD1O75127 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
PTCD1O75127 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PTCD1O75127 Y_RNA.31-201ENST00000362574 102 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 RNA5SP509-201ENST00000364577 119 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 RNU6-38P-201ENST00000384085 107 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms