Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AL353705.1-201ENST00000433468 480 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC108734.1-201ENST00000439549 399 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 RPL23AP76-201ENST00000441860 458 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 Z73417.1-201ENST00000447373 778 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 MRPL42P4-201ENST00000453267 443 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 RN7SL75P-201ENST00000461926 281 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC092754.2-201ENST00000463506 460 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 KCTD9P5-201ENST00000504141 1170 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC093534.1-201ENST00000504977 132 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 PDCL2P2-201ENST00000533651 189 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC107075.1-201ENST00000613695 314 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC018755.4-201ENST00000619715 454 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC048344.4-201ENST00000619744 527 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC017037.3-201ENST00000625016 472 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC093831.2-201ENST00000624393 3427 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 RNU6-582P-201ENST00000362989 107 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 RNU6-83P-201ENST00000384568 112 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 MIR34B-201ENST00000385076 84 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 RPL21P3-201ENST00000395517 478 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AL079342.2-201ENST00000403367 482 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AL136310.1-201ENST00000404926 654 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC245054.2-201ENST00000415639 319 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 RPL22P18-201ENST00000417197 377 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 ELOCP9-201ENST00000418624 239 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC005345.1-201ENST00000431868 217 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 RPL7P34-201ENST00000433316 712 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 HMGN2P20-201ENST00000437531 273 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC146507.2-201ENST00000460608 476 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC093767.1-201ENST00000504523 156 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 MTCYBP37-201ENST00000510642 1133 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 MTND4P33-201ENST00000556706 766 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC007349.4-201ENST00000608114 532 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC096577.2-201ENST00000611455 153 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC231759.1-201ENST00000616455 597 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AC021755.4-201ENST00000616620 456 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 AL590240.3-201ENST00000621416 943 ntBASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49BA6NDI0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 RNU6-251P-201ENST00000363235 104 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 RNU6-839P-201ENST00000363347 108 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 SNORD67-201ENST00000390833 111 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC110754.1-201ENST00000399740 601 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AL024474.1-201ENST00000404655 591 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 FCF1P2-201ENST00000415284 583 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 RPL23AP83-201ENST00000434984 473 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 MTCO2P20-201ENST00000437339 673 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC091862.1-201ENST00000438016 1100 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC241584.1-201ENST00000438469 1241 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC079776.3-201ENST00000450665 370 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms