Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNA5SP281-201ENST00000516504 135 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 HMGN1P28-201ENST00000521340 364 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 ERHP1-201ENST00000523006 310 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC007179.3-201ENST00000604976 235 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC096577.2-201ENST00000611455 153 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC011472.4-201ENST00000615848 491 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 CTSLP2-204ENST00000629029 392 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 FAM157B-203ENST00000639350 358 ntBASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
TCRBV3S1A0A5B6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AL109809.4-201ENST00000603520 2185 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AL512646.1-201ENST00000269395 1077 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 RNU6-1251P-201ENST00000364502 107 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AL356967.1-201ENST00000406305 431 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 RPS15AP40-201ENST00000419621 391 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 RPL7P37-201ENST00000425095 738 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AP001960.1-201ENST00000506494 658 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AC026801.2-201ENST00000515352 425 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 RNU6-319P-201ENST00000516025 108 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AP003717.3-201ENST00000544832 1180 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AL049838.1-201ENST00000563647 981 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 MIR1254-2-201ENST00000579553 63 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 PCNAP1-202ENST00000595299 752 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 VN1R78P-201ENST00000597393 564 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AL133370.2-201ENST00000619934 439 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 AC098657.3-201ENST00000620434 263 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
TCRBV3S1A0A5B6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
TCRBV3S1A0A5B6 MTND4P35-201ENST00000604257 1375 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 TAS2R15P-201ENST00000390674 928 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 RNU6-244P-201ENST00000391028 104 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 RNA5SP184-201ENST00000411071 108 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 RNA5SP498-201ENST00000411342 120 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AC096533.1-201ENST00000411645 353 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 UBE2D3P2-201ENST00000424409 445 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 PGBD4P3-201ENST00000440731 581 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 Z99127.2-201ENST00000441426 334 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AC044797.1-201ENST00000445744 679 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 snoU13.24-201ENST00000458998 104 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AC108734.3-201ENST00000481241 1165 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 RN7SL432P-201ENST00000484057 298 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 CAB39P1-201ENST00000502277 460 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AC097462.2-201ENST00000504623 481 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AC105914.1-201ENST00000511798 226 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 U73023.1-201ENST00000603134 700 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 AC020923.1-201ENST00000624021 917 ntBASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TCRBV3S1A0A5B6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC007342.9-201ENST00000623877 1385 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 NDUFB4P4-201ENST00000404822 243 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AL139156.1-201ENST00000412785 841 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC008280.1-201ENST00000418851 412 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC096632.1-201ENST00000427395 310 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AL513175.1-201ENST00000431492 780 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC096992.1-201ENST00000459808 709 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 RPL5P13-201ENST00000462840 709 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC010285.1-201ENST00000470580 392 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 RPL23AP70-201ENST00000483361 460 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 RPS15AP34-201ENST00000487776 387 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 MTCO2P9-201ENST00000503214 694 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms