Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 Y_RNA.573-201ENST00000384763 105 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC140479.3-201ENST00000418944 1126 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 UQCRBP1-201ENST00000421129 336 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AL732292.1-201ENST00000426692 226 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 MRPS10P2-201ENST00000431226 381 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC092162.1-201ENST00000432828 434 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 GPR143P-201ENST00000434155 205 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AL451139.1-201ENST00000434718 346 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 TDGF1P1-201ENST00000445734 527 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 RPL23AP20-201ENST00000447965 421 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC003071.1-201ENST00000451219 789 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 RPS3AP50-201ENST00000487064 803 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 STMN1P2-201ENST00000508435 439 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 VWA8P1-201ENST00000510889 176 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 DEFB109D-201ENST00000529497 240 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 RN7SL652P-201ENST00000577769 300 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC069061.3-201ENST00000582254 823 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC068790.5-201ENST00000602741 355 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC008966.2-201ENST00000606157 453 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AL023881.1-201ENST00000621088 301 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC244100.1-202ENST00000621554 382 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC009161.2-201ENST00000624626 138 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC005609.4-201ENST00000625071 447 ntBASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6-1085P-201ENST00000363576 107 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 MIR548F1-201ENST00000408667 84 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 SNORA11-201ENST00000408789 128 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU2-43P-201ENST00000410306 190 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AL591848.1-201ENST00000413092 322 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 NANOGP10-201ENST00000453325 895 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC010469.1-201ENST00000463864 576 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 RN7SL817P-201ENST00000480777 288 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC068305.1-201ENST00000497406 726 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC009646.1-201ENST00000510455 318 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC021146.1-201ENST00000511202 716 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC093840.1-201ENST00000511599 336 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 MYL12AP1-201ENST00000518490 515 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC022616.3-201ENST00000523940 148 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 HMGB1P33-201ENST00000563485 527 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC084783.1-201ENST00000565846 910 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 SNORA59B-202ENST00000578183 701 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 OR4K8P-201ENST00000578842 1048 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC020910.2-201ENST00000603635 610 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AL139286.1-201ENST00000604465 483 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC006338.1-201ENST00000618453 749 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 AC005086.4-201ENST00000623065 213 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 MIR6830-201ENST00000636015 70 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 ZNF137P-201ENST00000456718 1920 ntBASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms