Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AL513533.1-201ENST00000453728 415 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AC007547.1-201ENST00000462177 490 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AC007537.2-201ENST00000472093 511 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 RPL21P103-201ENST00000479921 488 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 RN7SL441P-201ENST00000492388 296 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AC006499.3-201ENST00000506077 748 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AC004062.1-201ENST00000509926 645 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 RN7SKP277-201ENST00000516895 283 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AC103843.2-201ENST00000530523 682 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 PTP4A1P6-201ENST00000531034 478 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AP003072.1-201ENST00000531740 145 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AL121821.2-201ENST00000556081 394 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AC006116.3-201ENST00000592968 361 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AC021646.1-201ENST00000605469 484 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 RNU6-89P-201ENST00000606519 100 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 AL031666.3-201ENST00000609320 1006 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 C2orf27A-204ENST00000623058 969 ntBASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.92□□□□□ -1.46
BRPF3Q9ULD4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 HSPE1P11-201ENST00000339579 310 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC067945.1-201ENST00000342609 618 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 RN7SKP113-201ENST00000363891 295 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 RNU4-20P-201ENST00000365601 151 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 MIR323B-201ENST00000385269 82 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 NDUFB4P5-201ENST00000415445 361 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 CHEK2P3-201ENST00000416118 248 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 CHIAP3-201ENST00000423668 1133 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 MTND1P18-201ENST00000448191 573 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 MTND1P9-201ENST00000453775 944 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 RNU6-329P-201ENST00000459618 107 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 RPS17P2-201ENST00000461663 408 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC087385.1-201ENST00000475062 312 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC126389.1-201ENST00000477436 290 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 RN7SL817P-201ENST00000480777 288 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC068305.1-201ENST00000497406 726 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 ENPP7P9-201ENST00000514456 627 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 RNA5SP43-201ENST00000516559 110 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 RNU6-798P-201ENST00000516912 103 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 GSTP1P1-201ENST00000548078 319 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 MIR4691-201ENST00000583764 85 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC068831.8-201ENST00000620171 435 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC091925.2-201ENST00000625059 256 ntBASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
BRPF3Q9ULD4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 AC004972.1-201ENST00000623934 2209 ntBASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 MIR514A2-201ENST00000385131 88 ntBASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 MIR514A3-201ENST00000385132 88 ntBASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 MIR195-201ENST00000385194 87 ntBASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 AL356967.1-201ENST00000406305 431 ntBASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 AL160275.2-201ENST00000412010 394 ntBASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 BTF3L4P3-201ENST00000418879 476 ntBASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 CKS1BP6-201ENST00000424932 240 ntBASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.9□□□□□ -1.46
BRPF3Q9ULD4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms