Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 Y_RNA.191-201ENST00000363972 113 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 MIR518C-201ENST00000384822 101 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 AL121835.1-201ENST00000404250 354 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 MLLT10P2-201ENST00000506434 249 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 RN7SKP209-201ENST00000516888 304 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 AC120036.3-201ENST00000517826 292 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 MIR6849-201ENST00000618543 69 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 MIR6813-201ENST00000621638 56 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 AC093831.2-201ENST00000624393 3427 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 AC091544.5-201ENST00000620192 3815 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 AL590065.1-201ENST00000603371 4774 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 ACEA_U3.1-201ENST00000363057 217 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 RNU6-509P-201ENST00000363519 107 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 RNA5SP176-201ENST00000390956 110 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 RNU6-821P-201ENST00000390995 107 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 LDHAP5-201ENST00000394996 622 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 AC108161.1-201ENST00000461060 402 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 RN7SL372P-201ENST00000461982 298 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 RN7SL259P-201ENST00000478499 253 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 RPL23AP80-201ENST00000495605 424 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 AC146944.3-201ENST00000509969 371 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 MRPS5P3-201ENST00000515577 166 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 SCARNA6-201ENST00000515982 265 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 RNU6-523P-201ENST00000516304 54 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 SAA3P-201ENST00000533267 365 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 AC013283.1-201ENST00000557282 492 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 U3.53-201ENST00000628922 216 ntBASIC7.67□□□□□ -1.18
RNF39Q9H2S5 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
RNF39Q9H2S5 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 AC009948.5-201ENST00000624360 4406 ntBASIC7.66□□□□□ -1.18
RNF39Q9H2S5 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 RNU6-799P-201ENST00000363567 107 ntBASIC7.66□□□□□ -1.18
RNF39Q9H2S5 Y_RNA.361-201ENST00000365515 120 ntBASIC7.66□□□□□ -1.18
RNF39Q9H2S5 ARSFP1-201ENST00000398758 477 ntBASIC7.66□□□□□ -1.18
RNF39Q9H2S5 MIR320B2-201ENST00000408479 138 ntBASIC7.66□□□□□ -1.18
RNF39Q9H2S5 Z98742.3-201ENST00000418637 326 ntBASIC7.66□□□□□ -1.18
RNF39Q9H2S5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 SNRPGP10-201ENST00000432323 225 ntBASIC7.66□□□□□ -1.18
RNF39Q9H2S5 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 RN7SL160P-201ENST00000468558 284 ntBASIC7.66□□□□□ -1.18
RNF39Q9H2S5 RN7SL797P-201ENST00000486314 297 ntBASIC7.66□□□□□ -1.18
RNF39Q9H2S5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 AC091152.3-201ENST00000604227 325 ntBASIC7.66□□□□□ -1.18
RNF39Q9H2S5 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RNF39Q9H2S5 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms