Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNA5SP282-201ENST00000516355 108 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 RNU6-826P-201ENST00000516827 104 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 MTCYBP28-201ENST00000566728 1132 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 SNORD53-201ENST00000579969 78 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AL158827.2-201ENST00000602494 330 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AC113368.1-201ENST00000603736 382 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 SUMO2P14-201ENST00000604488 293 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AL009028.1-201ENST00000604895 802 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AL359198.2-201ENST00000611836 194 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AL110115.1-201ENST00000614396 364 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AL691447.3-201ENST00000635020 330 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 CUL1P1-201ENST00000509510 2425 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 AL591034.1-201ENST00000407447 340 ntBASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 ATG3P1-201ENST00000419507 911 ntBASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 RPS26P56-201ENST00000444468 240 ntBASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 SRIP1-201ENST00000489235 288 ntBASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 TBCAP3-201ENST00000512475 312 ntBASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 Y_RNA.676-201ENST00000516393 96 ntBASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 ATP5F1P5-201ENST00000526403 760 ntBASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 AC107954.1-201ENST00000565906 727 ntBASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 AC011374.2-201ENST00000607135 526 ntBASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 AC243829.7-201ENST00000633081 225 ntBASIC3.07□□□□□ -1.92
UPF3BQ9BZI7 AL356057.1-202ENST00000402263 756 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 RPL19P1-201ENST00000411635 428 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 RPLP0P7-201ENST00000416050 667 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 OFD1P18Y-201ENST00000420889 959 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC005189.1-201ENST00000431286 310 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC092685.1-201ENST00000447960 1243 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC008280.2-201ENST00000455473 307 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC087879.1-201ENST00000474343 374 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 RNF138P1-201ENST00000502765 546 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC006445.2-201ENST00000510061 472 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 OR5AK3P-201ENST00000527486 1297 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC090312.2-201ENST00000582687 378 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC098826.3-201ENST00000603823 466 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AC073387.2-201ENST00000604797 784 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 RPL23AP88-201ENST00000605759 454 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 AL137246.1-201ENST00000607072 977 ntBASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UPF3BQ9BZI7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 SNORA51.12-201ENST00000384448 134 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 MIR9-1-201ENST00000385198 89 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 RNU2-52P-201ENST00000410680 190 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 FO393419.3-201ENST00000428741 282 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 ARL5AP4-201ENST00000430731 512 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 UBE2D3P1-201ENST00000436669 444 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AP001646.1-201ENST00000527936 915 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AL512310.1-201ENST00000548639 172 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 SNORD84-203ENST00000584275 78 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 OR4G1P-201ENST00000588632 938 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AL160237.3-201ENST00000604114 1013 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AC009159.1-201ENST00000618386 642 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AC092608.2-201ENST00000624427 218 ntBASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
UPF3BQ9BZI7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.04□□□□□ -1.92
UPF3BQ9BZI7 SNORD62.1-201ENST00000362541 86 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms