Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNA5SP301-201ENST00000362537 121 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-961P-201ENST00000363893 105 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-173P-201ENST00000364215 104 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CRP-204ENST00000368112 787 ntTSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-741P-201ENST00000383889 107 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-1074P-201ENST00000383995 104 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-166P-201ENST00000384371 107 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 MIR10B-201ENST00000385011 110 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNA5SP474-201ENST00000391234 90 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 MIR513C-201ENST00000401352 84 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF37CP-201ENST00000406795 241 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNA5SP280-201ENST00000411230 115 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AL590128.1-201ENST00000433407 286 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CKS1BP5-201ENST00000434172 273 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CR769767.1-201ENST00000436337 346 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 GEMIN8P3-201ENST00000445417 720 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 IFNA11P-201ENST00000446352 526 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 PRELID1P3-201ENST00000450055 643 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 EIF4A1P11-201ENST00000451239 222 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AC112187.1-201ENST00000455837 479 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RPL7AP56-201ENST00000476420 791 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RPL31P13-201ENST00000484151 370 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SL849P-201ENST00000485236 295 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AF186996.7-201ENST00000492781 209 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 BTF3L4P4-201ENST00000506381 449 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AC106800.3-201ENST00000511389 308 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 SNORA72.7-201ENST00000516349 94 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNA5SP290-201ENST00000517133 127 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNA5SP165-201ENST00000517142 115 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 IGLC4-201ENST00000517690 248 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 SUMO2P18-201ENST00000518873 252 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AP002001.1-203ENST00000534002 267 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AL391261.3-201ENST00000557194 520 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 MRPS21P9-201ENST00000571150 257 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 MIR4782-201ENST00000577987 79 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SL270P-201ENST00000579643 281 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 MIR7848-201ENST00000617402 101 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AL162377.2-201ENST00000624532 337 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 snoU18.1-201ENST00000629629 71 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AC026951.1-201ENST00000559530 2459 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AC092593.1-201ENST00000515413 1815 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 HSP90AA2P-201ENST00000530115 2196 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC005725.1-201ENST00000577346 2607 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms