Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC009097.3-201ENST00000563557 1018 ntBASIC3.37□□□□□ -1.87
CCM2Q9BSQ5 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.37□□□□□ -1.87
CCM2Q9BSQ5 AC063944.3-201ENST00000609969 533 ntBASIC3.37□□□□□ -1.87
CCM2Q9BSQ5 AC245297.2-201ENST00000610119 565 ntBASIC3.37□□□□□ -1.87
CCM2Q9BSQ5 AL392048.1-201ENST00000613946 534 ntBASIC3.37□□□□□ -1.87
CCM2Q9BSQ5 AC110801.1-201ENST00000623590 212 ntBASIC3.37□□□□□ -1.87
CCM2Q9BSQ5 AC091925.2-201ENST00000625059 256 ntBASIC3.37□□□□□ -1.87
CCM2Q9BSQ5 MTND5P24-201ENST00000438892 1767 ntBASIC3.37□□□□□ -1.87
CCM2Q9BSQ5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCM2Q9BSQ5 AL513302.2-201ENST00000562313 1842 ntBASIC3.37□□□□□ -1.87
CCM2Q9BSQ5 SRP72P2-201ENST00000344851 1979 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AL079343.1-201ENST00000572358 1771 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 MTCO1P12-201ENST00000414273 1543 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AL356274.2-201ENST00000624379 3752 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 RNU6-621P-201ENST00000364752 109 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 RNU6-629P-201ENST00000384061 103 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 MIR183-201ENST00000384958 110 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 RNA5SP171-201ENST00000391071 115 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 DHFRP6-201ENST00000401776 268 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 USP9YP33-201ENST00000412220 421 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 XKRYP1-201ENST00000423438 492 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AP000907.1-201ENST00000428428 510 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 YME1L1P1-201ENST00000429435 297 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AL159987.2-201ENST00000432754 307 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 XKRYP2-201ENST00000432915 492 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 USP9YP35-201ENST00000435696 412 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC097262.1-201ENST00000452559 548 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 RPS27AP1-201ENST00000475545 471 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 FAM172BP-201ENST00000487497 1089 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC090453.1-201ENST00000495560 436 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC021146.8-201ENST00000507455 733 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC093281.2-201ENST00000510153 597 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC010625.1-201ENST00000511296 403 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 RNU5A-4P-201ENST00000516588 111 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 MTCYBP41-201ENST00000528913 1123 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC007458.1-201ENST00000542812 373 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 SYF2P1-201ENST00000550658 413 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 TGIF1P1-201ENST00000558095 802 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC067852.3-201ENST00000589177 561 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 TUSC7.1-201ENST00000610969 165 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC084757.4-201ENST00000616350 526 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC007496.3-201ENST00000624987 3443 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 AC093908.1-201ENST00000623125 8092 ntBASIC3.36□□□□□ -1.87
CCM2Q9BSQ5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 RNU4-28P-201ENST00000364739 141 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 RPL23AP29-201ENST00000397284 453 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 EI24P1-201ENST00000416584 867 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 RPS15AP6-201ENST00000420703 385 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC019178.2-201ENST00000423595 505 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC005019.1-201ENST00000436455 431 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 PRDX3P3-201ENST00000447765 522 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 MTCO3P11-201ENST00000455103 774 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC012181.1-201ENST00000479895 423 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC020893.1-201ENST00000502452 580 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC104090.1-201ENST00000506341 1171 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC022861.1-201ENST00000522981 663 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 EEF1B2P4-201ENST00000551398 348 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms