Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC004656.1-201ENST00000568479 4951 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AC112243.1-201ENST00000623949 3851 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AL606537.1-201ENST00000607258 2011 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 AC022325.1-201ENST00000502748 2199 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 AC068870.1-201ENST00000563737 2455 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 RNU6-371P-201ENST00000364283 108 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 Y_RNA.400-201ENST00000383963 111 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 RNU2-61P-201ENST00000411069 191 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 RPS23P10-201ENST00000416185 486 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 RPS4XP5-201ENST00000419038 768 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 AC133134.1-201ENST00000466800 359 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 RNY3P16-201ENST00000516338 101 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 Y_RNA.710-201ENST00000516975 110 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 FO393422.1-201ENST00000603908 708 ntBASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNIP1Q8TAD8 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC079753.1-201ENST00000623243 3868 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC062022.1-201ENST00000451026 1684 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 RNU6-1255P-201ENST00000363434 112 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 Y_RNA.358-201ENST00000365491 99 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 RNU6-637P-201ENST00000384050 107 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 SNORA70-201ENST00000384436 135 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AL590704.1-201ENST00000402856 794 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 RPL21P90-201ENST00000415692 466 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AL451136.1-201ENST00000435399 325 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 Y_RNA.638-201ENST00000459374 113 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 RN7SL561P-201ENST00000488553 281 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 RPL30P1-201ENST00000488676 339 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC139365.2-201ENST00000517972 253 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 H3F3AP1-201ENST00000559984 334 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC023824.2-201ENST00000566185 400 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 MIR4282-201ENST00000583613 67 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 AC240442.1-201ENST00000616055 283 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 SNORD39.4-201ENST00000620099 78 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 CDC27P2-201ENST00000425026 1922 ntBASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNIP1Q8TAD8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms