Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AC005183.1-201ENST00000603687 1979 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AL359893.1-201ENST00000447628 1580 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 RNU6-288P-201ENST00000363690 104 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 U8.8-201ENST00000365399 135 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 RPL12P12-201ENST00000424633 501 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AC130360.1-201ENST00000425489 1117 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AC074250.1-201ENST00000511117 192 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AC130365.2-201ENST00000525882 1201 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AC018552.1-201ENST00000562099 811 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AC136932.1-201ENST00000574771 208 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 OR1E3-201ENST00000575608 948 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 MIR4701-201ENST00000583094 63 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AC006272.2-201ENST00000594725 163 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AL121917.1-203ENST00000605534 577 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AC006329.2-201ENST00000611491 394 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 SNORD39.4-201ENST00000620099 78 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 AC091953.5-201ENST00000622919 233 ntBASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC116Q8IYX3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 BTBD10P1-201ENST00000549824 1352 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC000374.1-201ENST00000434698 1745 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 DNM1P47-203ENST00000571780 12667 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC009643.2-201ENST00000603543 1448 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 Y_RNA.81-201ENST00000362997 102 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 Y_RNA.439-201ENST00000384119 94 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 GCNT1P4-201ENST00000404096 329 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC099677.1-201ENST00000420575 175 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 TIMM8BP2-201ENST00000445940 251 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 EEF1A1P1-201ENST00000447052 739 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 EEF1B2P3-201ENST00000447718 678 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 TPT1P13-201ENST00000449760 499 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AL591623.2-201ENST00000449978 222 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AL162739.1-201ENST00000450606 307 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 PPIAP7-201ENST00000454070 489 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 ACA64.4-201ENST00000459070 127 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AL671862.1-201ENST00000515851 349 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 RNU6-346P-201ENST00000516288 111 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC103783.1-201ENST00000520506 373 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AP000620.1-201ENST00000527147 504 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC093023.1-201ENST00000547375 507 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC005951.2-201ENST00000576282 495 ntBASIC5.68□□□□□ -1.5
CCDC116Q8IYX3 AC119403.2-201ENST00000590960 598 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms