Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RNU4-78P-201ENST00000410940 126 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 RPS6P14-201ENST00000425165 719 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC244505.3-201ENST00000454598 187 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 GAPDHP39-201ENST00000481866 979 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC103975.1-201ENST00000482506 483 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 VPS26AP1-201ENST00000483197 979 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC069306.1-201ENST00000507006 843 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 MTCYBP37-201ENST00000510642 1133 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 SCARNA13-201ENST00000516672 275 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 RN7SKP282-201ENST00000516824 299 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC126365.2-201ENST00000580630 379 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ATL3Q6DD88 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 AC022509.4-201ENST00000621404 572 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATL3Q6DD88 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ATL3Q6DD88 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATL3Q6DD88 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATL3Q6DD88 AC000403.1-201ENST00000613696 3585 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 RNU6-582P-201ENST00000362989 107 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 RNU6-263P-201ENST00000363811 107 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 AL139098.1-201ENST00000407291 389 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 FCF1P2-201ENST00000415284 583 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 HSPE1P1-201ENST00000421494 318 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 Z93242.1-201ENST00000427102 353 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 HMGB1P15-201ENST00000453854 435 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.24□□□□□ -1.89
ATL3Q6DD88 MTCO3P2-201ENST00000457365 171 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 snoU13.4-201ENST00000458916 104 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 AC003982.1-202ENST00000469928 248 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATL3Q6DD88 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATL3Q6DD88 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATL3Q6DD88 AC068339.2-201ENST00000534395 618 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 AC087894.1-201ENST00000538359 518 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.24□□□□□ -1.89
ATL3Q6DD88 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.24□□□□□ -1.89
ATL3Q6DD88 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.24□□□□□ -1.89
ATL3Q6DD88 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.24□□□□□ -1.89
ATL3Q6DD88 AC034268.2-201ENST00000571784 482 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.24□□□□□ -1.89
ATL3Q6DD88 SNORD84-203ENST00000584275 78 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 MAGOH2P-202ENST00000584384 429 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 AC090330.1-201ENST00000588646 764 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 VN1R87P-201ENST00000596706 487 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 MIR92B-201ENST00000607575 96 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.24□□□□□ -1.89
ATL3Q6DD88 AP005137.2-201ENST00000609238 400 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 AL512427.1-201ENST00000618593 349 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 CR381653.2-201ENST00000624041 768 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 AC126544.2-201ENST00000625174 749 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 MIR3651-201ENST00000630427 90 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 ZNF663P-202ENST00000641770 1131 ntBASIC3.24□□□□□ -1.89
ATL3Q6DD88 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATL3Q6DD88 AL136520.1-201ENST00000600311 1322 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATL3Q6DD88 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATL3Q6DD88 AC244517.1-201ENST00000606030 2086 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATL3Q6DD88 RNU6-1249P-201ENST00000363237 111 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 SNORA38.1-201ENST00000364172 131 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 RNVU1-14-201ENST00000384770 164 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 AC069282.1-201ENST00000411911 526 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 VN1R34P-201ENST00000447387 883 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 AC112492.1-201ENST00000449607 712 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 AC140076.1-201ENST00000449897 361 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 NIPA2P5-201ENST00000452282 464 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 MRPL42P4-201ENST00000453267 443 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 RPL9P33-201ENST00000484311 566 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATL3Q6DD88 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 snoZ278.1-201ENST00000517059 112 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 AC239860.2-201ENST00000525886 270 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms