Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 RN7SL57P-201ENST00000493687 290 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 IGLV3-30-201ENST00000524362 298 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 CPDP1-201ENST00000579660 283 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AC119403.2-201ENST00000590960 598 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AC097372.5-201ENST00000623665 376 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 U6.92-201ENST00000636464 89 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AC116667.2-201ENST00000641075 823 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 OR13C1P-202ENST00000641378 2919 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AP001148.1-201ENST00000624124 2359 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 SNORD113-8-201ENST00000363497 74 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 Y_RNA.272-201ENST00000364696 102 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 RNU6-1130P-201ENST00000365434 107 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 Y_RNA.533-201ENST00000384596 114 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 RPS3AP2-201ENST00000407190 754 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 MTCYBP2-201ENST00000407745 171 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 TMEM167AP1-201ENST00000423409 219 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 HMGB3P24-201ENST00000433260 622 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 FABP5P13-201ENST00000452144 328 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AC124945.1-201ENST00000485133 188 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 RNU6-1219P-201ENST00000516143 112 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 SCARNA21.2-201ENST00000516600 166 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AC090151.1-201ENST00000520784 730 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 MIR4675-201ENST00000577898 77 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 MIR4282-201ENST00000583613 67 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AC115085.1-201ENST00000588924 229 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AC067852.5-201ENST00000589299 310 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 Y_RNA.772-201ENST00000606692 102 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 MIR6768-201ENST00000610734 72 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 uc_338.26-201ENST00000612659 160 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 AL590099.1-201ENST00000615276 138 ntBASIC5.4□□□□□ -1.54
RNFT1Q5M7Z0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 PARP4P2-201ENST00000446672 3326 ntBASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 HSPA8P4-201ENST00000511877 1920 ntBASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 AC016745.2-201ENST00000608834 3443 ntBASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RNFT1Q5M7Z0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 OR4G2P-202ENST00000641004 1759 ntBASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNFT1Q5M7Z0 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms