Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 SNORD91B-202ENST00000608459 222 ntBASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.04□□□□□ -1.44
TMEM259Q4ZIN3 AL359955.1-201ENST00000455242 3275 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 RNU6-874P-201ENST00000362390 105 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 RNA5SP375-201ENST00000362975 119 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 SNORA51.8-201ENST00000384234 132 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 MIR1203-201ENST00000408812 85 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AL451062.2-201ENST00000427515 271 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 MTND6P12-201ENST00000428247 522 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AL133396.1-201ENST00000432048 687 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 RPL21P2-201ENST00000440049 481 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AC007998.1-201ENST00000474156 672 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AC069499.1-201ENST00000489433 509 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 RPL7P51-201ENST00000490532 749 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 SNORD46.2-201ENST00000516021 102 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AC087369.1-201ENST00000520775 996 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AP000648.1-201ENST00000529682 397 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AL121603.1-201ENST00000553815 142 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AC012254.3-201ENST00000591183 2117 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AL591516.1-201ENST00000611326 274 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 MIR6862-1-201ENST00000613016 70 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 MIR6862-2-201ENST00000614755 70 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AL138825.1-201ENST00000618587 192 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 ZNF72P-201ENST00000425869 1908 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 AC010266.2-201ENST00000564741 3255 ntBASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
TMEM259Q4ZIN3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.02□□□□□ -1.44
TMEM259Q4ZIN3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AC090971.4-201ENST00000560291 1800 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 Y_RNA.106-201ENST00000363189 100 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 RN7SKP78-201ENST00000364711 318 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 Y_RNA.396-201ENST00000383949 103 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 RNU6-356P-201ENST00000384140 107 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 RNA5SP284-201ENST00000384547 118 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 RNU6-1156P-201ENST00000410365 100 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AL030996.1-201ENST00000411430 235 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AL035660.1-201ENST00000422041 222 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 BX276092.6-201ENST00000430476 250 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 RPS24P13-201ENST00000442520 397 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 BX276092.8-201ENST00000455722 250 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AL583843.1-201ENST00000456070 346 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 RPL23AP2-201ENST00000471227 466 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AC009120.1-201ENST00000493458 473 ntBASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.02□□□□□ -1.45
TMEM259Q4ZIN3 ACA59.1-201ENST00000515966 143 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms