Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL031176.1-201ENST00000604554 466 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 AL161637.1-201ENST00000622380 412 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 DUXAP9-208ENST00000622815 614 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.11□□□□□ -1.59
SSRP1Q08945 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.11□□□□□ -1.59
SSRP1Q08945 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSRP1Q08945 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSRP1Q08945 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SSRP1Q08945 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SSRP1Q08945 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.11□□□□□ -1.59
SSRP1Q08945 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSRP1Q08945 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSRP1Q08945 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSRP1Q08945 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SSRP1Q08945 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSRP1Q08945 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SSRP1Q08945 RNU6-1120P-201ENST00000362988 108 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSRP1Q08945 RNU6-877P-201ENST00000383868 107 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 RNU11-4P-201ENST00000391149 133 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 RPS4XP8-201ENST00000402039 771 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.1□□□□□ -1.59
SSRP1Q08945 AC092447.6-201ENST00000414578 210 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 CCDC58P2-201ENST00000417131 366 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AL139095.3-201ENST00000419672 1203 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AL109913.1-201ENST00000421173 514 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AL356387.2-201ENST00000422272 243 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 MRPS18BP2-201ENST00000434310 759 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 RPL7P54-201ENST00000438336 674 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 HMGB3P12-201ENST00000438745 556 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.1□□□□□ -1.59
SSRP1Q08945 NMD3P1-201ENST00000439704 1488 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.1□□□□□ -1.59
SSRP1Q08945 AC079781.2-201ENST00000446424 169 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.1□□□□□ -1.59
SSRP1Q08945 AC022364.2-201ENST00000457963 554 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.1□□□□□ -1.59
SSRP1Q08945 snoU13.3-201ENST00000459441 104 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 RN7SL812P-201ENST00000493791 279 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SSRP1Q08945 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.1□□□□□ -1.59
SSRP1Q08945 AC104383.1-201ENST00000530297 370 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AP000857.1-201ENST00000532151 543 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSRP1Q08945 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.1□□□□□ -1.59
SSRP1Q08945 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.1□□□□□ -1.59
SSRP1Q08945 RN7SL52P-201ENST00000584271 284 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AC008752.3-201ENST00000588113 712 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AC079587.1-201ENST00000603846 277 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 AC093788.1-201ENST00000609356 927 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 RN7SL722P-201ENST00000617780 284 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 RN7SL565P-201ENST00000618246 284 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.1□□□□□ -1.59
SSRP1Q08945 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.1□□□□□ -1.59
SSRP1Q08945 AC005609.4-201ENST00000625071 447 ntBASIC5.1□□□□□ -1.59
SSRP1Q08945 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSRP1Q08945 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSRP1Q08945 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSRP1Q08945 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SSRP1Q08945 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSRP1Q08945 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSRP1Q08945 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSRP1Q08945 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSRP1Q08945 MTCO1P9-201ENST00000505577 1534 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SSRP1Q08945 RNU6-278P-201ENST00000390945 109 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSRP1Q08945 RNU4-78P-201ENST00000410940 126 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 RN7SKP247-201ENST00000411094 308 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AMD1P2-201ENST00000412936 992 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 JKAMPP1-201ENST00000413804 919 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 OR1AA1P-201ENST00000419597 916 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AC010655.1-201ENST00000449336 292 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AC009963.2-201ENST00000453431 138 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 RAD23BP3-201ENST00000454157 1152 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 RPS29P33-201ENST00000456717 146 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AP000942.1-201ENST00000463969 747 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 RPL36AP51-201ENST00000487216 318 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSRP1Q08945 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.09□□□□□ -1.59
SSRP1Q08945 RNU6-410P-201ENST00000517006 107 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 IGLVIV-65-201ENST00000517313 360 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AC011979.2-201ENST00000527568 352 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 AC100770.1-201ENST00000532310 322 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AL162413.1-201ENST00000603198 110 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms