Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AL136164.4-201ENST00000625013 2135 ntBASIC3.13□□□□□ -1.91
ACLYP53396 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ACLYP53396 RNU6-730P-201ENST00000383954 104 ntBASIC3.13□□□□□ -1.91
ACLYP53396 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ACLYP53396 AC006960.1-201ENST00000419980 153 ntBASIC3.13□□□□□ -1.91
ACLYP53396 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.13□□□□□ -1.91
ACLYP53396 AL035410.1-201ENST00000427409 427 ntBASIC3.13□□□□□ -1.91
ACLYP53396 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.13□□□□□ -1.91
ACLYP53396 SSXP4-201ENST00000451349 245 ntBASIC3.13□□□□□ -1.91
ACLYP53396 AC128713.1-201ENST00000471495 306 ntBASIC3.13□□□□□ -1.91
ACLYP53396 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ACLYP53396 AC092185.1-201ENST00000491371 97 ntBASIC3.13□□□□□ -1.91
ACLYP53396 AC011352.3-201ENST00000505162 593 ntBASIC3.13□□□□□ -1.91
ACLYP53396 RNU1-41P-201ENST00000516161 162 ntBASIC3.13□□□□□ -1.91
ACLYP53396 RNU1-48P-201ENST00000516400 162 ntBASIC3.13□□□□□ -1.91
ACLYP53396 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.13□□□□□ -1.91
ACLYP53396 FAM60DP-201ENST00000524174 632 ntBASIC3.13□□□□□ -1.91
ACLYP53396 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.13□□□□□ -1.91
ACLYP53396 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.13□□□□□ -1.91
ACLYP53396 AC124283.4-201ENST00000581815 456 ntBASIC3.13□□□□□ -1.91
ACLYP53396 XIAPP1-201ENST00000603162 600 ntBASIC3.13□□□□□ -1.91
ACLYP53396 AL590808.1-201ENST00000618696 141 ntBASIC3.13□□□□□ -1.91
ACLYP53396 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.13□□□□□ -1.91
ACLYP53396 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ACLYP53396 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.13□□□□□ -1.91
ACLYP53396 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
ACLYP53396 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ACLYP53396 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ACLYP53396 AC002546.1-201ENST00000588041 2504 ntBASIC3.12□□□□□ -1.91
ACLYP53396 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ACLYP53396 RNU6-1249P-201ENST00000363237 111 ntBASIC3.12□□□□□ -1.91
ACLYP53396 RNA5SP68-201ENST00000363885 119 ntBASIC3.12□□□□□ -1.91
ACLYP53396 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.12□□□□□ -1.91
ACLYP53396 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ACLYP53396 RNU6-821P-201ENST00000390995 107 ntBASIC3.12□□□□□ -1.91
ACLYP53396 RNA5SP21-201ENST00000410917 96 ntBASIC3.12□□□□□ -1.91
ACLYP53396 BX664727.1-201ENST00000416024 466 ntBASIC3.12□□□□□ -1.91
ACLYP53396 GXYLT1P1-201ENST00000446657 490 ntBASIC3.12□□□□□ -1.91
ACLYP53396 AL513124.1-201ENST00000450410 614 ntBASIC3.12□□□□□ -1.91
ACLYP53396 snoU13.4-201ENST00000458916 104 ntBASIC3.12□□□□□ -1.91
ACLYP53396 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.12□□□□□ -1.91
ACLYP53396 AC078857.1-201ENST00000469870 667 ntBASIC3.12□□□□□ -1.91
ACLYP53396 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.12□□□□□ -1.91
ACLYP53396 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.12□□□□□ -1.91
ACLYP53396 AC117522.3-201ENST00000507974 584 ntBASIC3.12□□□□□ -1.91
ACLYP53396 AC004062.1-201ENST00000509926 645 ntBASIC3.12□□□□□ -1.91
ACLYP53396 AC121161.1-201ENST00000510606 652 ntBASIC3.12□□□□□ -1.91
ACLYP53396 AC008413.1-201ENST00000511864 177 ntBASIC3.12□□□□□ -1.91
ACLYP53396 AC104027.1-201ENST00000521887 300 ntBASIC3.12□□□□□ -1.91
ACLYP53396 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ACLYP53396 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.12□□□□□ -1.91
ACLYP53396 AP002906.1-201ENST00000603405 233 ntBASIC3.12□□□□□ -1.91
ACLYP53396 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
ACLYP53396 AL390240.1-201ENST00000612950 384 ntBASIC3.12□□□□□ -1.91
ACLYP53396 MIR6817-201ENST00000615588 66 ntBASIC3.12□□□□□ -1.91
ACLYP53396 MTND2P41-201ENST00000637599 773 ntBASIC3.12□□□□□ -1.91
ACLYP53396 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.12□□□□□ -1.91
ACLYP53396 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ACLYP53396 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ACLYP53396 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ACLYP53396 ELF2P3-201ENST00000445099 1506 ntBASIC3.11□□□□□ -1.91
ACLYP53396 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
ACLYP53396 RNU6-609P-201ENST00000365459 107 ntBASIC3.11□□□□□ -1.91
ACLYP53396 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ACLYP53396 RNU6-932P-201ENST00000391108 106 ntBASIC3.11□□□□□ -1.91
ACLYP53396 AL023807.1-201ENST00000407932 359 ntBASIC3.11□□□□□ -1.91
ACLYP53396 GTF2IP23-201ENST00000423746 351 ntBASIC3.11□□□□□ -1.91
ACLYP53396 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.11□□□□□ -1.91
ACLYP53396 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.11□□□□□ -1.91
ACLYP53396 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.11□□□□□ -1.91
ACLYP53396 TRBV26-201ENST00000456572 344 ntBASIC3.11□□□□□ -1.91
ACLYP53396 RPS3P1-201ENST00000456781 192 ntBASIC3.11□□□□□ -1.91
ACLYP53396 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.11□□□□□ -1.91
ACLYP53396 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.11□□□□□ -1.91
ACLYP53396 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.11□□□□□ -1.91
ACLYP53396 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
ACLYP53396 AP000790.1-201ENST00000528891 737 ntBASIC3.11□□□□□ -1.91
ACLYP53396 AL512310.1-201ENST00000548639 172 ntBASIC3.11□□□□□ -1.91
ACLYP53396 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.11□□□□□ -1.91
ACLYP53396 AC087481.2-201ENST00000565492 330 ntBASIC3.11□□□□□ -1.91
ACLYP53396 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
ACLYP53396 SNORD39.3-201ENST00000584451 71 ntBASIC3.11□□□□□ -1.91
ACLYP53396 AC104763.2-201ENST00000604179 382 ntBASIC3.11□□□□□ -1.91
ACLYP53396 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.11□□□□□ -1.91
ACLYP53396 AC092650.2-201ENST00000619984 902 ntBASIC3.11□□□□□ -1.91
ACLYP53396 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.11□□□□□ -1.91
ACLYP53396 AC092608.2-201ENST00000624427 218 ntBASIC3.11□□□□□ -1.91
ACLYP53396 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.11□□□□□ -1.91
ACLYP53396 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.11□□□□□ -1.91
ACLYP53396 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ACLYP53396 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ACLYP53396 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.1□□□□□ -1.91
ACLYP53396 AC092326.2-201ENST00000624772 1561 ntBASIC3.1□□□□□ -1.91
ACLYP53396 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ACLYP53396 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ACLYP53396 SNORA70B-201ENST00000384210 135 ntBASIC3.1□□□□□ -1.91
ACLYP53396 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
ACLYP53396 MTCO2P31-201ENST00000402702 684 ntBASIC3.1□□□□□ -1.91
ACLYP53396 HMGB3P23-201ENST00000414981 585 ntBASIC3.1□□□□□ -1.91
ACLYP53396 NPM1P11-201ENST00000417106 855 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms