Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL022099.1-201ENST00000604551 712 ntBASIC2.56□□□□□ -2
NUP98P52948 AL391834.1-201ENST00000609609 560 ntBASIC2.56□□□□□ -2
NUP98P52948 XIST_intron.1-201ENST00000619444 68 ntBASIC2.56□□□□□ -2
NUP98P52948 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUP98P52948 AC092326.2-201ENST00000624772 1561 ntBASIC2.56□□□□□ -2
NUP98P52948 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUP98P52948 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.55□□□□□ -2
NUP98P52948 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.55□□□□□ -2
NUP98P52948 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
NUP98P52948 AC008173.1-201ENST00000418901 264 ntBASIC2.55□□□□□ -2
NUP98P52948 UBE2V2P1-201ENST00000434717 398 ntBASIC2.55□□□□□ -2
NUP98P52948 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.55□□□□□ -2
NUP98P52948 MTCYBP12-201ENST00000440559 1134 ntBASIC2.55□□□□□ -2
NUP98P52948 RPL23AP33-201ENST00000442301 452 ntBASIC2.55□□□□□ -2
NUP98P52948 AC007677.1-201ENST00000445757 515 ntBASIC2.55□□□□□ -2
NUP98P52948 AC092754.2-201ENST00000463506 460 ntBASIC2.55□□□□□ -2
NUP98P52948 RPS20P22-201ENST00000473700 357 ntBASIC2.55□□□□□ -2
NUP98P52948 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.55□□□□□ -2
NUP98P52948 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.55□□□□□ -2
NUP98P52948 RNU4-18P-201ENST00000516751 149 ntBASIC2.55□□□□□ -2
NUP98P52948 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.55□□□□□ -2
NUP98P52948 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.55□□□□□ -2
NUP98P52948 AC120053.1-201ENST00000607706 736 ntBASIC2.55□□□□□ -2
NUP98P52948 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.55□□□□□ -2
NUP98P52948 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
NUP98P52948 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.55□□□□□ -2
NUP98P52948 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NUP98P52948 AL161781.1-201ENST00000354277 403 ntBASIC2.54□□□□□ -2
NUP98P52948 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NUP98P52948 SNORA40.18-201ENST00000391200 128 ntBASIC2.54□□□□□ -2
NUP98P52948 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.54□□□□□ -2
NUP98P52948 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.54□□□□□ -2
NUP98P52948 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
NUP98P52948 EI24P1-201ENST00000416584 867 ntBASIC2.54□□□□□ -2
NUP98P52948 ZYG11AP1-201ENST00000430329 837 ntBASIC2.54□□□□□ -2
NUP98P52948 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.54□□□□□ -2
NUP98P52948 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.54□□□□□ -2
NUP98P52948 RNA5SP458-201ENST00000516188 119 ntBASIC2.54□□□□□ -2
NUP98P52948 RNU6-548P-201ENST00000517083 115 ntBASIC2.54□□□□□ -2
NUP98P52948 HSPE1P18-201ENST00000517602 280 ntBASIC2.54□□□□□ -2
NUP98P52948 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.54□□□□□ -2
NUP98P52948 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
NUP98P52948 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.54□□□□□ -2
NUP98P52948 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.54□□□□□ -2
NUP98P52948 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.54□□□□□ -2
NUP98P52948 LRRC37A5P-203ENST00000580181 585 ntBASIC2.54□□□□□ -2
NUP98P52948 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.54□□□□□ -2
NUP98P52948 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
NUP98P52948 AC048347.1-201ENST00000624621 427 ntBASIC2.54□□□□□ -2
NUP98P52948 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NUP98P52948 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.54□□□□□ -2
NUP98P52948 DYNLT3P1-201ENST00000378574 347 ntBASIC2.54□□□□□ -2
NUP98P52948 MIR320B1-201ENST00000390209 79 ntBASIC2.54□□□□□ -2
NUP98P52948 RPL23AP39-201ENST00000415533 405 ntBASIC2.54□□□□□ -2
NUP98P52948 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.54□□□□□ -2
NUP98P52948 AL445685.2-201ENST00000422551 342 ntBASIC2.54□□□□□ -2
NUP98P52948 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.54□□□□□ -2
NUP98P52948 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.54□□□□□ -2
NUP98P52948 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.54□□□□□ -2
NUP98P52948 RPL38P4-201ENST00000502376 214 ntBASIC2.54□□□□□ -2
NUP98P52948 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
NUP98P52948 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.54□□□□□ -2
NUP98P52948 AC007536.1-201ENST00000533382 349 ntBASIC2.54□□□□□ -2
NUP98P52948 AMZ2P1-203ENST00000565833 850 ntBASIC2.54□□□□□ -2
NUP98P52948 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.54□□□□□ -2
NUP98P52948 LLPHP1-201ENST00000603571 367 ntBASIC2.54□□□□□ -2
NUP98P52948 uc_338.9-201ENST00000617424 182 ntBASIC2.54□□□□□ -2
NUP98P52948 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.53□□□□□ -2
NUP98P52948 AC010680.1-201ENST00000590024 3590 ntBASIC2.53□□□□□ -2
NUP98P52948 AL359715.4-201ENST00000606629 1436 ntBASIC2.53□□□□□ -2
NUP98P52948 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NUP98P52948 MIR9-3-201ENST00000385084 90 ntBASIC2.53□□□□□ -2
NUP98P52948 RNA5SP344-201ENST00000411081 104 ntBASIC2.53□□□□□ -2
NUP98P52948 SPA17P1-201ENST00000416656 452 ntBASIC2.53□□□□□ -2
NUP98P52948 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
NUP98P52948 SNRPGP3-201ENST00000469405 227 ntBASIC2.53□□□□□ -2
NUP98P52948 RPS4XP6-201ENST00000477670 797 ntBASIC2.53□□□□□ -2
NUP98P52948 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.53□□□□□ -2
NUP98P52948 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.53□□□□□ -2
NUP98P52948 HMGB3P15-201ENST00000507326 574 ntBASIC2.53□□□□□ -2
NUP98P52948 AC108120.2-201ENST00000512973 294 ntBASIC2.53□□□□□ -2
NUP98P52948 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.53□□□□□ -2
NUP98P52948 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.53□□□□□ -2
NUP98P52948 AC011472.4-201ENST00000615848 491 ntBASIC2.53□□□□□ -2
NUP98P52948 AC015726.3-201ENST00000624501 418 ntBASIC2.53□□□□□ -2
NUP98P52948 AL157700.1-201ENST00000561973 1432 ntBASIC2.53□□□□□ -2.01
NUP98P52948 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NUP98P52948 AC007256.1-201ENST00000392253 2765 ntBASIC2.52□□□□□ -2.01
NUP98P52948 RNA5SP99-201ENST00000364020 114 ntBASIC2.52□□□□□ -2.01
NUP98P52948 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.52□□□□□ -2.01
NUP98P52948 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.52□□□□□ -2.01
NUP98P52948 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.52□□□□□ -2.01
NUP98P52948 SNORD13-201ENST00000459299 104 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AP000926.3-201ENST00000497201 299 ntBASIC2.52□□□□□ -2.01
NUP98P52948 TTC39CP1-201ENST00000512513 755 ntBASIC2.52□□□□□ -2.01
NUP98P52948 RNU6-295P-201ENST00000516901 104 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.52□□□□□ -2.01
NUP98P52948 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.52□□□□□ -2.01
NUP98P52948 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.52□□□□□ -2.01
NUP98P52948 CENPUP2-201ENST00000555897 1186 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms