Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC004024.1-201ENST00000549244 247 ntBASIC5.55□□□□□ -1.52
RNF144AP50876 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF144AP50876 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF144AP50876 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF144AP50876 HNRNPCP4-201ENST00000571636 900 ntBASIC5.55□□□□□ -1.52
RNF144AP50876 MIR4675-201ENST00000577898 77 ntBASIC5.55□□□□□ -1.52
RNF144AP50876 RN7SL230P-201ENST00000580835 303 ntBASIC5.55□□□□□ -1.52
RNF144AP50876 AL158827.2-201ENST00000602494 330 ntBASIC5.55□□□□□ -1.52
RNF144AP50876 AC124916.2-201ENST00000604416 224 ntBASIC5.55□□□□□ -1.52
RNF144AP50876 SDR42E1P1-201ENST00000611327 477 ntBASIC5.55□□□□□ -1.52
RNF144AP50876 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF144AP50876 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF144AP50876 AL691447.3-201ENST00000635020 330 ntBASIC5.55□□□□□ -1.52
RNF144AP50876 AC000095.2-202ENST00000637415 154 ntBASIC5.55□□□□□ -1.52
RNF144AP50876 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF144AP50876 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF144AP50876 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RNF144AP50876 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RNF144AP50876 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF144AP50876 AC008758.3-201ENST00000507003 1829 ntBASIC5.55□□□□□ -1.52
RNF144AP50876 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF144AP50876 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF144AP50876 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF144AP50876 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF144AP50876 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF144AP50876 AC020656.2-201ENST00000613291 5309 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RNF144AP50876 AL161756.3-201ENST00000641216 2071 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF144AP50876 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF144AP50876 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF144AP50876 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
RNF144AP50876 MIR613-201ENST00000385248 95 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF144AP50876 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF144AP50876 Y_RNA.592-201ENST00000410274 109 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF144AP50876 GNG5P5-201ENST00000420444 220 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF144AP50876 EIF1P2-201ENST00000428233 350 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 OR4C10P-201ENST00000434991 931 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AC016027.4-201ENST00000450866 277 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF144AP50876 Z92846.1-201ENST00000456203 268 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 RN7SL254P-201ENST00000460609 284 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF144AP50876 AC098847.1-201ENST00000473094 348 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 HMGN2P13-201ENST00000476476 274 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AC006499.3-201ENST00000506077 748 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 NDUFB5P1-201ENST00000508134 564 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AC008716.1-201ENST00000511084 513 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AC113155.1-201ENST00000511141 769 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 SERF1AP1-201ENST00000514575 187 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AC011853.1-201ENST00000518911 454 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AC103783.1-201ENST00000520506 373 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AP000648.1-201ENST00000529682 397 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 EIF4A2P5-201ENST00000529914 499 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AC024405.2-202ENST00000532731 184 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.54□□□□□ -1.52
RNF144AP50876 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF144AP50876 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF144AP50876 MIR4701-201ENST00000583094 63 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF144AP50876 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF144AP50876 AC005344.1-201ENST00000613391 459 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AL031601.2-202ENST00000622650 282 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RNF144AP50876 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF144AP50876 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF144AP50876 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF144AP50876 AL353796.1-201ENST00000561542 3241 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 EOGT-210ENST00000615922 1931 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 AP000560.1-201ENST00000624150 1937 ntBASIC5.54□□□□□ -1.52
RNF144AP50876 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF144AP50876 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF144AP50876 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF144AP50876 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF144AP50876 AP001148.1-201ENST00000624124 2359 ntBASIC5.53□□□□□ -1.52
RNF144AP50876 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF144AP50876 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF144AP50876 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF144AP50876 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF144AP50876 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
RNF144AP50876 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF144AP50876 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF144AP50876 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RNF144AP50876 BRAFP1-201ENST00000445336 2703 ntBASIC5.53□□□□□ -1.52
RNF144AP50876 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF144AP50876 RNU4-44P-201ENST00000363050 141 ntBASIC5.53□□□□□ -1.52
RNF144AP50876 RNU6-288P-201ENST00000363690 104 ntBASIC5.53□□□□□ -1.52
RNF144AP50876 RNU1-65P-201ENST00000363919 148 ntBASIC5.53□□□□□ -1.52
RNF144AP50876 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF144AP50876 Y_RNA.458-201ENST00000384240 102 ntBASIC5.53□□□□□ -1.52
RNF144AP50876 SNORD115-46-201ENST00000390982 71 ntBASIC5.53□□□□□ -1.52
RNF144AP50876 COX6CP10-201ENST00000416832 224 ntBASIC5.53□□□□□ -1.52
RNF144AP50876 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF144AP50876 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF144AP50876 AL354766.1-201ENST00000423396 542 ntBASIC5.53□□□□□ -1.52
RNF144AP50876 AKR1B10P1-201ENST00000425765 942 ntBASIC5.53□□□□□ -1.52
RNF144AP50876 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms