Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.92□□□□□ -1.94
CPS1P31327 OR5D17P-201ENST00000531492 978 ntBASIC2.92□□□□□ -1.94
CPS1P31327 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.92□□□□□ -1.94
CPS1P31327 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CPS1P31327 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CPS1P31327 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CPS1P31327 U8.9-201ENST00000365667 134 ntBASIC2.91□□□□□ -1.94
CPS1P31327 RNA5SP239-201ENST00000410218 129 ntBASIC2.91□□□□□ -1.94
CPS1P31327 USP9YP7-201ENST00000436723 430 ntBASIC2.91□□□□□ -1.94
CPS1P31327 RPL39P40-201ENST00000445481 146 ntBASIC2.91□□□□□ -1.94
CPS1P31327 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.91□□□□□ -1.94
CPS1P31327 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.91□□□□□ -1.94
CPS1P31327 USP9YP32-201ENST00000452432 430 ntBASIC2.91□□□□□ -1.94
CPS1P31327 AC092798.1-201ENST00000458542 409 ntBASIC2.91□□□□□ -1.94
CPS1P31327 RPL5P13-201ENST00000462840 709 ntBASIC2.91□□□□□ -1.94
CPS1P31327 RPAP2P1-201ENST00000603626 1168 ntBASIC2.91□□□□□ -1.94
CPS1P31327 AC091953.2-201ENST00000623979 160 ntBASIC2.91□□□□□ -1.94
CPS1P31327 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CPS1P31327 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.91□□□□□ -1.94
CPS1P31327 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
CPS1P31327 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CPS1P31327 HMGB1P10-201ENST00000395823 563 ntBASIC2.9□□□□□ -1.95
CPS1P31327 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CPS1P31327 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.9□□□□□ -1.95
CPS1P31327 FABP5P13-201ENST00000452144 328 ntBASIC2.9□□□□□ -1.95
CPS1P31327 AP000705.1-201ENST00000454567 350 ntBASIC2.9□□□□□ -1.95
CPS1P31327 CFTRP1-201ENST00000456646 183 ntBASIC2.9□□□□□ -1.95
CPS1P31327 RNU6-826P-201ENST00000516827 104 ntBASIC2.9□□□□□ -1.95
CPS1P31327 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.9□□□□□ -1.95
CPS1P31327 AP005136.1-201ENST00000579765 429 ntBASIC2.9□□□□□ -1.95
CPS1P31327 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.9□□□□□ -1.95
CPS1P31327 AP001542.2-201ENST00000593141 364 ntBASIC2.9□□□□□ -1.95
CPS1P31327 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CPS1P31327 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.89□□□□□ -1.95
CPS1P31327 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.89□□□□□ -1.95
CPS1P31327 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CPS1P31327 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
CPS1P31327 SNORA40.18-201ENST00000391200 128 ntBASIC2.88□□□□□ -1.95
CPS1P31327 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.88□□□□□ -1.95
CPS1P31327 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.88□□□□□ -1.95
CPS1P31327 AC008571.1-201ENST00000467232 300 ntBASIC2.88□□□□□ -1.95
CPS1P31327 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.88□□□□□ -1.95
CPS1P31327 ATG10-AS1-201ENST00000504846 648 ntBASIC2.88□□□□□ -1.95
CPS1P31327 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CPS1P31327 TBCAP3-201ENST00000512475 312 ntBASIC2.88□□□□□ -1.95
CPS1P31327 RPS3AP4-201ENST00000555161 764 ntBASIC2.88□□□□□ -1.95
CPS1P31327 AMZ2P1-203ENST00000565833 850 ntBASIC2.88□□□□□ -1.95
CPS1P31327 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.88□□□□□ -1.95
CPS1P31327 AC120053.1-201ENST00000607706 736 ntBASIC2.88□□□□□ -1.95
CPS1P31327 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.88□□□□□ -1.95
CPS1P31327 AL137847.3-201ENST00000611521 109 ntBASIC2.88□□□□□ -1.95
CPS1P31327 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.88□□□□□ -1.95
CPS1P31327 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.88□□□□□ -1.95
CPS1P31327 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CPS1P31327 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CPS1P31327 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CPS1P31327 SNORA51.11-201ENST00000384442 131 ntBASIC2.88□□□□□ -1.95
CPS1P31327 SAR1AP2-201ENST00000392696 594 ntBASIC2.88□□□□□ -1.95
CPS1P31327 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC2.88□□□□□ -1.95
CPS1P31327 MTND5P21-201ENST00000531961 522 ntBASIC2.88□□□□□ -1.95
CPS1P31327 MIR4255-201ENST00000579351 72 ntBASIC2.88□□□□□ -1.95
CPS1P31327 AC060766.3-201ENST00000591442 263 ntBASIC2.88□□□□□ -1.95
CPS1P31327 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.88□□□□□ -1.95
CPS1P31327 AC010680.1-201ENST00000590024 3590 ntBASIC2.87□□□□□ -1.95
CPS1P31327 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.87□□□□□ -1.95
CPS1P31327 XIAPP3-201ENST00000312918 795 ntBASIC2.87□□□□□ -1.95
CPS1P31327 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.87□□□□□ -1.95
CPS1P31327 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CPS1P31327 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CPS1P31327 SNORA67.5-201ENST00000391036 107 ntBASIC2.87□□□□□ -1.95
CPS1P31327 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.87□□□□□ -1.95
CPS1P31327 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.87□□□□□ -1.95
CPS1P31327 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.87□□□□□ -1.95
CPS1P31327 TVP23BP2-201ENST00000455082 615 ntBASIC2.87□□□□□ -1.95
CPS1P31327 RPL23AP63-201ENST00000498752 471 ntBASIC2.87□□□□□ -1.95
CPS1P31327 AC092436.3-201ENST00000511788 257 ntBASIC2.87□□□□□ -1.95
CPS1P31327 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.87□□□□□ -1.95
CPS1P31327 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.87□□□□□ -1.95
CPS1P31327 MIR3670-2-201ENST00000582974 65 ntBASIC2.87□□□□□ -1.95
CPS1P31327 MIR3670-1-201ENST00000584160 65 ntBASIC2.87□□□□□ -1.95
CPS1P31327 MIR3670-3-201ENST00000584855 65 ntBASIC2.87□□□□□ -1.95
CPS1P31327 MIR3670-4-201ENST00000612260 65 ntBASIC2.87□□□□□ -1.95
CPS1P31327 MIR6504-201ENST00000613520 61 ntBASIC2.87□□□□□ -1.95
CPS1P31327 AL589994.2-201ENST00000621124 579 ntBASIC2.87□□□□□ -1.95
CPS1P31327 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.87□□□□□ -1.95
CPS1P31327 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.87□□□□□ -1.95
CPS1P31327 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.87□□□□□ -1.95
CPS1P31327 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.87□□□□□ -1.95
CPS1P31327 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CPS1P31327 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CPS1P31327 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.86□□□□□ -1.95
CPS1P31327 AL021407.1-201ENST00000404531 386 ntBASIC2.86□□□□□ -1.95
CPS1P31327 AC005005.2-201ENST00000420779 380 ntBASIC2.86□□□□□ -1.95
CPS1P31327 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.86□□□□□ -1.95
CPS1P31327 AP000926.1-201ENST00000479573 241 ntBASIC2.86□□□□□ -1.95
CPS1P31327 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.86□□□□□ -1.95
CPS1P31327 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.86□□□□□ -1.95
CPS1P31327 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.86□□□□□ -1.95
CPS1P31327 HMGN2P28-201ENST00000606102 262 ntBASIC2.86□□□□□ -1.95
CPS1P31327 AC017076.1-201ENST00000607613 578 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms