Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AP000942.1-201ENST00000463969 747 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FOXN1O15353 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXN1O15353 HMGN1P11-201ENST00000508668 303 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 AC009646.1-201ENST00000510455 318 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXN1O15353 EIF4BP1-201ENST00000554881 351 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXN1O15353 AL133457.1-201ENST00000564251 987 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 AL391840.1-201ENST00000571144 367 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 AC060780.3-201ENST00000589464 80 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 AC022432.1-201ENST00000595739 310 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXN1O15353 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXN1O15353 AL161729.4-201ENST00000604650 476 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 AL592295.2-201ENST00000612578 206 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 AC073348.1-201ENST00000623002 331 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXN1O15353 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
FOXN1O15353 NSRP1P1-201ENST00000444067 1693 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXN1O15353 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXN1O15353 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 AP004289.2-201ENST00000444413 1457 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FOXN1O15353 AC011266.1-201ENST00000624119 3569 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 HMGB1P5-201ENST00000255320 642 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 Y_RNA.89-201ENST00000363031 102 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 RNU5D-1-201ENST00000363299 116 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 RNU6-534P-201ENST00000364877 106 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 SNORA48.5-201ENST00000391143 135 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FOXN1O15353 AL139095.1-201ENST00000404326 391 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AL160275.2-201ENST00000412010 394 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.75□□□□□ -1.65
FOXN1O15353 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.75□□□□□ -1.65
FOXN1O15353 CEACAMP1-201ENST00000434624 1035 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 MTCYBP45-201ENST00000435243 565 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.75□□□□□ -1.65
FOXN1O15353 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.75□□□□□ -1.65
FOXN1O15353 AC073522.1-201ENST00000483312 377 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 LRRC34P2-201ENST00000514850 553 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 RNU6-416P-201ENST00000516265 103 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FOXN1O15353 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.75□□□□□ -1.65
FOXN1O15353 AC025260.1-201ENST00000548858 430 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AL442663.2-201ENST00000554385 511 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.75□□□□□ -1.65
FOXN1O15353 MIR4637-201ENST00000582405 84 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.75□□□□□ -1.65
FOXN1O15353 AP000942.4-201ENST00000604811 241 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AL121655.1-201ENST00000605811 308 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AC015813.4-201ENST00000610469 179 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AC131902.3-201ENST00000611767 581 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AC005344.1-201ENST00000613391 459 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 MIR8058-201ENST00000615737 89 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 MIR8057-201ENST00000620957 69 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AL445264.1-201ENST00000621719 171 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 AL359880.1-201ENST00000621879 266 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 AC119674.1-212ENST00000641155 993 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.75□□□□□ -1.65
FOXN1O15353 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXN1O15353 ERCC6-202ENST00000374127 1782 ntBASIC4.75□□□□□ -1.65
FOXN1O15353 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXN1O15353 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN1O15353 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.75□□□□□ -1.65
FOXN1O15353 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXN1O15353 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXN1O15353 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
FOXN1O15353 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
FOXN1O15353 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
FOXN1O15353 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXN1O15353 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXN1O15353 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXN1O15353 RNU6-433P-201ENST00000363216 104 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 SNORA63-201ENST00000363450 132 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 Y_RNA.296-201ENST00000364930 108 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
FOXN1O15353 RNU4-31P-201ENST00000384211 141 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 Y_RNA.529-201ENST00000384586 119 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 Y_RNA.573-201ENST00000384763 105 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 MIR93-201ENST00000385024 80 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 RNU6-244P-201ENST00000391028 104 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 AC068533.2-201ENST00000411872 306 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXN1O15353 SDCBPP3-201ENST00000419629 891 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.74□□□□□ -1.65
FOXN1O15353 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXN1O15353 UBE2FP3-201ENST00000436366 524 ntBASIC4.74□□□□□ -1.65
FOXN1O15353 AC073587.1-201ENST00000447093 876 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms