Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AL592182.3-201ENST00000642132 3304 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AC104623.2-202ENST00000623477 4002 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 RNU5E-1-201ENST00000362477 120 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 Y_RNA.144-201ENST00000363521 113 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 Y_RNA.216-201ENST00000364205 93 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 SNORA63C-201ENST00000364578 129 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 SNORA62.3-201ENST00000365110 153 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 AC234781.4-201ENST00000419384 244 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 AL353678.1-201ENST00000422735 741 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 AC010881.1-201ENST00000433830 235 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 BRK1P2-201ENST00000442875 223 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 RPL7P22-201ENST00000466005 733 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 TMEM251P1-201ENST00000503717 318 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 RN7SKP116-201ENST00000516902 319 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 AC104986.1-201ENST00000517978 436 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 AL355836.1-201ENST00000555951 870 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 AL158196.1-201ENST00000616786 434 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 MIR6075-201ENST00000620782 95 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 AL161912.2-201ENST00000565707 3007 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 MTCO1P9-201ENST00000505577 1534 ntBASIC5.54□□□□□ -1.52
CNTNAP4Q9C0A0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 Y_RNA.202-201ENST00000364083 110 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 SNORA70.4-201ENST00000365509 134 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 RNU6-1160P-201ENST00000384546 104 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 MIR559-201ENST00000385188 96 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC097374.1-203ENST00000400783 485 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 MIR548P-201ENST00000408336 84 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 GPM6BP2-201ENST00000432046 144 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 GPR143P-201ENST00000434155 205 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 BNIP3P2-201ENST00000441221 577 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 GPM6BP1-201ENST00000446387 144 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC079781.2-201ENST00000446424 169 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 Y_RNA.632-201ENST00000459189 102 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AP001025.2-201ENST00000490908 477 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC010587.1-201ENST00000505809 469 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 FTH1P21-201ENST00000512179 511 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC108471.1-201ENST00000513977 287 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 RN7SKP13-201ENST00000515933 244 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 SOD1P3-201ENST00000518682 454 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 BNIP3P6-201ENST00000549284 499 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 DYNLL1P4-201ENST00000549314 266 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC093249.1-201ENST00000567049 203 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC104237.2-201ENST00000612456 443 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC130324.3-201ENST00000614165 542 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC015914.2-201ENST00000618167 288 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC005858.4-201ENST00000623191 700 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 U6.101-201ENST00000637707 76 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC100778.3-201ENST00000580060 1750 ntBASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP4Q9C0A0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms