Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AC073136.1-201ENST00000449426 2884 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AC232271.1-201ENST00000602455 2715 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU6-834P-201ENST00000362367 110 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 Y_RNA.43-201ENST00000362670 111 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 Y_RNA.71-201ENST00000362892 104 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 RNA5SP114-201ENST00000363780 113 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU6-105P-201ENST00000363909 104 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 Y_RNA.218-201ENST00000364218 104 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 Y_RNA.319-201ENST00000365138 92 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 MIR539-201ENST00000365690 78 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 LCN1P2-201ENST00000372030 223 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU6-80P-201ENST00000384195 107 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 MIR128-2-201ENST00000384893 84 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU6-239P-201ENST00000390990 99 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 RNA5SP53-201ENST00000391299 120 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 PRELID1P1-201ENST00000403549 660 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AL133173.1-201ENST00000423458 397 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 CYCSP32-201ENST00000440548 321 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AL450023.1-201ENST00000450868 751 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 SNORA35.1-201ENST00000458908 128 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 RPS26P11-201ENST00000463445 348 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AC020890.1-201ENST00000491837 504 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 REG4-204ENST00000530654 612 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 RN7SL664P-201ENST00000584239 305 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AC011487.3-201ENST00000593607 453 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AC007390.2-201ENST00000606229 3803 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AL008718.3-201ENST00000610217 321 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AL031777.2-201ENST00000611953 196 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 BX005040.2-201ENST00000620504 370 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AP001264.1-201ENST00000620602 703 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AC008626.2-201ENST00000624425 248 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 AC243725.1-201ENST00000637164 436 ntBASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-1Q9BYR8 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 POT1-202ENST00000393329 3950 ntTSL 5 BASIC3.34□□□□□ -1.88
KRTAP3-1Q9BYR8 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AC079753.1-201ENST00000623243 3868 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AC105235.1-201ENST00000623208 1816 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 AC104581.5-201ENST00000624171 7141 ntBASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-1Q9BYR8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms