Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNA5SP97-201ENST00000365006 84 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 U3.20-201ENST00000390909 217 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 MTCYBP36-201ENST00000404146 440 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 RPS7P15-201ENST00000415804 584 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 EI24P1-201ENST00000416584 867 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 MTCO3P12-201ENST00000416718 547 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 MTND4LP10-201ENST00000435146 291 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 MTCYBP45-201ENST00000435243 565 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 FAM103A2P-201ENST00000444122 354 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 USP9YP12-201ENST00000450481 570 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 RPS20P32-201ENST00000456044 356 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 HMGB1P25-201ENST00000468402 607 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 PPIAP15-201ENST00000479662 484 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AC106707.2-201ENST00000484182 374 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 RPL23AP41-201ENST00000484754 458 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 RN7SL271P-201ENST00000487601 295 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AC093278.1-201ENST00000494700 600 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 SNORA74D-201ENST00000516404 141 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 RNU6-1003P-201ENST00000517099 105 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AC007599.1-201ENST00000568688 1174 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 MIR5187-201ENST00000583479 76 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AC040904.1-201ENST00000590850 223 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AL365440.1-201ENST00000436135 2167 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 RNU6-1249P-201ENST00000363237 111 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 Y_RNA.318-201ENST00000365131 97 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 Y_RNA.436-201ENST00000384097 102 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 MIR491-201ENST00000384877 84 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 Y_RNA.598-201ENST00000410480 95 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 RNA5SP146-201ENST00000410743 123 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC099677.1-201ENST00000420575 175 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC083863.1-201ENST00000438811 231 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC112653.1-201ENST00000443851 386 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AL645939.1-201ENST00000453429 797 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 S100A11P1-201ENST00000477525 312 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC091435.1-201ENST00000505442 584 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC022968.1-201ENST00000567372 442 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 AC012182.1-201ENST00000570133 895 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 RSL24D1P11-201ENST00000591045 491 ntBASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTFDC1Q9BY42 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 CCT4P2-201ENST00000233836 1548 ntBASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 AC139713.2-215ENST00000641428 5037 ntBASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 RNU6-533P-201ENST00000384144 107 ntBASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 AL359704.1-201ENST00000411586 781 ntBASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 CCDC58P2-201ENST00000417131 366 ntBASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 AC127526.1-201ENST00000417526 366 ntBASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 AL035423.1-201ENST00000420331 213 ntBASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 AL139247.1-201ENST00000422768 325 ntBASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.79□□□□□ -1.64
RTFDC1Q9BY42 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms