Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
YIPF4Q9BSR8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
YIPF4Q9BSR8 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
YIPF4Q9BSR8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
YIPF4Q9BSR8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
YIPF4Q9BSR8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
YIPF4Q9BSR8 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
YIPF4Q9BSR8 AC114947.2-201ENST00000565748 2125 ntBASIC4.81□□□□□ -1.64
YIPF4Q9BSR8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
YIPF4Q9BSR8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.81□□□□□ -1.64
YIPF4Q9BSR8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 U3.2-201ENST00000362981 210 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 RN7SKP103-201ENST00000363848 320 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 RNY3P13-201ENST00000365542 102 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 RNU6-831P-201ENST00000384548 107 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 MIR585-201ENST00000384887 94 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 MIR765-201ENST00000390226 114 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AL583834.1-201ENST00000406943 343 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 RPS7P15-201ENST00000415804 584 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC108075.1-201ENST00000424692 529 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 OR4K11P-201ENST00000431829 904 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 RPS20P5-201ENST00000434808 360 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 RNA5SP103-201ENST00000459503 118 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC091180.1-201ENST00000462104 372 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC007686.1-201ENST00000488511 463 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC004062.1-201ENST00000509926 645 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 RNU6-327P-201ENST00000516270 127 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AP005435.4-201ENST00000529514 284 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AL121821.2-201ENST00000556081 394 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC012182.1-201ENST00000570133 895 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 OR4K8P-201ENST00000578842 1048 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC233702.9-201ENST00000581528 203 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC087763.1-201ENST00000603391 286 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AC024940.4-201ENST00000605507 246 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 RNU6-89P-201ENST00000606519 100 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 Mico1.1-201ENST00000611698 204 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 AL161637.1-201ENST00000622380 412 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
YIPF4Q9BSR8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 RNA5SP183-201ENST00000362452 119 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 RNA5SP443-201ENST00000363083 132 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 Y_RNA.231-201ENST00000364358 102 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 RNU4-48P-201ENST00000365559 182 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 Y_RNA.431-201ENST00000384086 102 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 SNORA51.8-201ENST00000384234 132 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 MIR19A-201ENST00000384878 82 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 RNU6-510P-201ENST00000391239 108 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 U3.32-201ENST00000408116 212 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 BX323014.1-201ENST00000412876 237 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AC092447.6-201ENST00000414578 210 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AL137014.1-201ENST00000420490 1226 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AC099677.1-201ENST00000420575 175 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 DDX3P2-201ENST00000446138 111 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 RN7SL346P-201ENST00000491561 294 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 Y_RNA.665-201ENST00000516177 98 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AC006349.1-201ENST00000555526 235 ntBASIC4.79□□□□□ -1.64
YIPF4Q9BSR8 AC026464.5-201ENST00000562497 722 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms