Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 PTGES3P3-201ENST00000511479 482 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 ARL2BPP6-201ENST00000512757 439 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 RNU6-150P-201ENST00000516237 95 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 OR4A12P-201ENST00000530847 918 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC120057.2-201ENST00000571520 271 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC090312.1-201ENST00000580637 348 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC009977.1-201ENST00000586015 570 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC006504.3-201ENST00000586818 523 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC104458.1-201ENST00000608243 463 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AL592295.2-201ENST00000612578 206 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 AC099669.2-201ENST00000616549 437 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 MIR4727-201ENST00000622232 55 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 FAM91A3P-201ENST00000456826 2544 ntBASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF548Q8NEK5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 OR4A15-201ENST00000314706 1035 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 Y_RNA.9-201ENST00000362354 101 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 RNU6-114P-201ENST00000384704 105 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC008280.1-201ENST00000418851 412 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 RPL37P1-201ENST00000432310 284 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC023347.2-201ENST00000433994 462 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 RPS4XP4-201ENST00000443195 763 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 HMGN3P1-201ENST00000453847 193 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 RAD23BP3-201ENST00000454157 1152 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 NDUFB4P2-201ENST00000509515 391 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AF131216.2-201ENST00000512316 564 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 SNORA18.6-201ENST00000516792 115 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC013828.2-201ENST00000532487 235 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 MIR544B-201ENST00000582372 78 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 MIR5684-201ENST00000585074 65 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 BCRP9-201ENST00000605312 388 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC006338.1-201ENST00000618453 749 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AL158209.2-201ENST00000619266 216 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 MIR7702-201ENST00000621931 59 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 DDX18P3-201ENST00000404856 2007 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 AC007529.1-201ENST00000418574 2178 ntBASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF548Q8NEK5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
ZNF548Q8NEK5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF548Q8NEK5 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF548Q8NEK5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF548Q8NEK5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF548Q8NEK5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
ZNF548Q8NEK5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms