Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RPL21P40-201ENST00000428586 483 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AC005326.1-201ENST00000429197 123 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AC012497.1-201ENST00000429392 575 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 VN1R34P-201ENST00000447387 883 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 RPL21P8-201ENST00000465083 535 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 VPS26AP1-201ENST00000483197 979 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 ARL2BPP5-201ENST00000523141 481 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 SETP2-201ENST00000553886 926 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 MIR5680-201ENST00000577577 84 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 VN1R87P-201ENST00000596706 487 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 DPRXP5-201ENST00000604662 539 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AC128687.1-201ENST00000605304 619 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AC092954.1-201ENST00000609121 445 ntBASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC50Q8IVM0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC50Q8IVM0 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 RNVU1-14-201ENST00000384770 164 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 ARF4P3-201ENST00000397387 509 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 RNU6-712P-201ENST00000410558 100 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 RNU4-47P-201ENST00000410876 114 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AL024507.1-201ENST00000412741 274 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AL133384.1-201ENST00000412744 351 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 MTCO3P1-205ENST00000422088 832 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 RPL17P49-201ENST00000443728 411 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 HMGB1P25-201ENST00000468402 607 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 SULT1C2P1-202ENST00000562418 459 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AC083760.1-201ENST00000589621 670 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AL445435.1-201ENST00000604232 665 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AC092574.1-201ENST00000609771 420 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AL390240.1-201ENST00000612950 384 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 MIR7112-201ENST00000616126 65 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AL512506.2-201ENST00000624472 458 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.15□□□□□ -1.91
CCDC50Q8IVM0 AL161431.1-201ENST00000618966 4205 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 DEFB109C-201ENST00000382575 264 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 DEFB109B-201ENST00000382656 264 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 MIR181B1-201ENST00000385240 110 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 SSXP9-201ENST00000417503 292 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AC241584.1-201ENST00000438469 1241 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 ARF4P4-201ENST00000439608 520 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AL591503.2-201ENST00000442314 1005 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AL034418.1-201ENST00000448675 860 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 RPS20P24-201ENST00000457473 361 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 WBP1LP4-201ENST00000505043 344 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AC087894.1-201ENST00000538359 518 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AC007318.2-201ENST00000620999 243 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AC026422.1-201ENST00000623961 452 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 AC080188.3-201ENST00000624842 748 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 MIR622-201ENST00000638396 96 ntBASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC50Q8IVM0 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms