Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHFQ7M4L6 MTND5P33-201ENST00000571250 1450 ntBASIC3.67□□□□□ -1.82
SHFQ7M4L6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHFQ7M4L6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC026951.1-201ENST00000559530 2459 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHFQ7M4L6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHFQ7M4L6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHFQ7M4L6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 SNORD35B-201ENST00000363660 87 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 RNVU1-6-201ENST00000364688 164 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 RNU6-1215P-201ENST00000384441 102 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 RNU4-78P-201ENST00000410940 126 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 RN7SKP33-201ENST00000410942 340 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 RPS3AP44-201ENST00000425466 790 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 RPS29P17-201ENST00000430795 166 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 MRPS18BP2-201ENST00000434310 759 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 Z74696.2-201ENST00000436514 498 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 RPL22P17-201ENST00000438729 315 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC009963.2-201ENST00000453431 138 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 RPL23AP24-201ENST00000458203 385 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 snoU109.4-201ENST00000458953 143 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 RPL35AP28-201ENST00000459730 331 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC021382.1-201ENST00000483523 359 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 NIPA2P2-201ENST00000496376 1083 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC068305.1-201ENST00000497406 726 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC138853.1-201ENST00000503549 823 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC006390.1-201ENST00000508068 283 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 SNORA18.6-201ENST00000516792 115 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 RNU6-201P-201ENST00000517100 61 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 RNU4-60P-201ENST00000517239 135 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC105233.3-201ENST00000531125 744 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHFQ7M4L6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHFQ7M4L6 SETP7-201ENST00000552169 453 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AL157394.1-201ENST00000562983 1224 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC137800.2-201ENST00000574375 120 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC012417.1-201ENST00000582307 1039 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 HMGN1P30-201ENST00000589286 268 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.66□□□□□ -1.82
SHFQ7M4L6 AC109347.2-201ENST00000610220 349 ntBASIC3.66□□□□□ -1.82
SHFQ7M4L6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHFQ7M4L6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHFQ7M4L6 BDP1P-201ENST00000582658 1990 ntBASIC3.65□□□□□ -1.82
SHFQ7M4L6 AC006504.1-201ENST00000562493 3666 ntBASIC3.65□□□□□ -1.82
SHFQ7M4L6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
SHFQ7M4L6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.65□□□□□ -1.82
SHFQ7M4L6 FAM91A3P-201ENST00000456826 2544 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 RNU6-1042P-201ENST00000384204 107 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 Y_RNA.516-201ENST00000384541 124 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 RNU6-648P-201ENST00000410190 107 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 RNU4-25P-201ENST00000410569 230 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC092447.6-201ENST00000414578 210 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 CHIAP3-201ENST00000423668 1133 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC108734.1-201ENST00000439549 399 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 RPL17P49-201ENST00000443728 411 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 NANOGNBP1-201ENST00000448444 480 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 GAPDHP17-201ENST00000449858 1001 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 PPIAP3-201ENST00000450588 505 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 AP1S2P1-201ENST00000457344 379 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 snoU13.1-201ENST00000459157 104 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 RN7SL691P-201ENST00000494487 301 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 RPL29P14-201ENST00000495837 428 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC026726.1-201ENST00000512859 601 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC022616.6-201ENST00000520479 119 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AP003181.2-201ENST00000528941 181 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms