Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
LIMK2P53671 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIMK2P53671 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIMK2P53671 USP8P1-201ENST00000494673 3183 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 RIOK3P1-201ENST00000418778 1528 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 AC032011.1-201ENST00000611703 1549 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
LIMK2P53671 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LIMK2P53671 RNU1-75P-201ENST00000347264 129 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 RNU6-525P-201ENST00000363685 104 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 Y_RNA.169-201ENST00000363745 96 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LIMK2P53671 Y_RNA.493-201ENST00000384422 102 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 RNU6-83P-201ENST00000384568 112 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 AL121972.1-201ENST00000402023 252 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 MTND4LP20-201ENST00000402379 270 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 PTP4A1P5-201ENST00000420305 455 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 MRPS36P1-201ENST00000421291 307 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.46□□□□□ -1.86
LIMK2P53671 AL158156.1-201ENST00000422509 473 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 RPL7P44-201ENST00000424827 742 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.46□□□□□ -1.86
LIMK2P53671 RPL23AP67-201ENST00000465341 474 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 PABPC1P3-201ENST00000469174 459 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 AC108734.3-201ENST00000481241 1165 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.46□□□□□ -1.86
LIMK2P53671 DSTNP2-201ENST00000504533 515 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.46□□□□□ -1.86
LIMK2P53671 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.46□□□□□ -1.86
LIMK2P53671 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.46□□□□□ -1.86
LIMK2P53671 AC107934.2-201ENST00000518653 310 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.46□□□□□ -1.86
LIMK2P53671 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.46□□□□□ -1.86
LIMK2P53671 AC138915.2-201ENST00000569776 97 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 MIR5195-201ENST00000583555 115 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 DPRXP5-201ENST00000604662 539 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 AC073968.1-201ENST00000618594 637 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 U4.6-201ENST00000621618 127 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.46□□□□□ -1.86
LIMK2P53671 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LIMK2P53671 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.46□□□□□ -1.86
LIMK2P53671 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.46□□□□□ -1.86
LIMK2P53671 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
LIMK2P53671 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LIMK2P53671 GABPAP-201ENST00000419271 1356 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 AL021368.2-201ENST00000606125 5352 ntBASIC3.46□□□□□ -1.86
LIMK2P53671 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIMK2P53671 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LIMK2P53671 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LIMK2P53671 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIMK2P53671 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
LIMK2P53671 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIMK2P53671 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.46□□□□□ -1.86
LIMK2P53671 AC116096.1-201ENST00000566804 2314 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.45□□□□□ -1.86
LIMK2P53671 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIMK2P53671 AC104454.1-201ENST00000421341 1401 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIMK2P53671 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIMK2P53671 Y_RNA.25-201ENST00000362528 102 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 RNU6-657P-201ENST00000383904 107 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 MIR607-201ENST00000385241 96 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 RNU6-837P-201ENST00000391056 108 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK2P53671 AL590084.1-201ENST00000407885 387 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 RNU2-37P-201ENST00000410695 177 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK2P53671 RPL31P12-201ENST00000422587 358 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 GLRXP1-201ENST00000423261 334 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 GTF2IP23-201ENST00000423746 351 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 ATP5JP1-201ENST00000431631 322 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.45□□□□□ -1.86
LIMK2P53671 AL008629.1-201ENST00000438615 184 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 FGF7P5-201ENST00000441829 291 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK2P53671 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
LIMK2P53671 RFC5P1-201ENST00000454419 874 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 CEACAMP4-201ENST00000457676 421 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.45□□□□□ -1.86
LIMK2P53671 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
LIMK2P53671 RPS3AP22-201ENST00000488297 769 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 HSPD1P15-201ENST00000505573 1122 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AC026427.2-201ENST00000506228 536 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK2P53671 MTCO3P28-201ENST00000513351 515 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 RNU6-1225P-201ENST00000516336 65 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 RNU2-58P-201ENST00000516403 183 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 SNORA74D-201ENST00000516404 141 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 RNU5A-4P-201ENST00000516588 111 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK2P53671 PDCL2P2-201ENST00000533651 189 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK2P53671 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK2P53671 AC008127.2-201ENST00000549925 1075 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK2P53671 AC067852.3-201ENST00000589177 561 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK2P53671 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK2P53671 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK2P53671 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms