Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RN7SKP209-201ENST00000516888 304 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLCN3P51790 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 AC024909.2-201ENST00000553035 286 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLCN3P51790 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 AC103987.3-201ENST00000582071 292 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 AL031985.2-201ENST00000600955 480 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AC025165.5-201ENST00000602802 578 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AC083899.3-201ENST00000603413 594 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AC064872.1-201ENST00000604823 1072 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AC018714.1-201ENST00000605028 208 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 U73479.1-201ENST00000618062 168 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AL607023.1-201ENST00000620045 248 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 Z69908.1-201ENST00000622603 247 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AL732618.1-201ENST00000623251 301 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCN3P51790 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLCN3P51790 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 DCAF13P1-201ENST00000495256 1330 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCN3P51790 AC097714.1-201ENST00000511272 1647 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCN3P51790 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCN3P51790 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCN3P51790 RNVU1-14-201ENST00000384770 164 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 MIR124-3-201ENST00000384866 87 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 MIR34B-201ENST00000385076 84 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 RPL31P1-201ENST00000398116 372 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 RPS3AP26-201ENST00000398259 784 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 CYCSP45-201ENST00000402289 315 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 AC006548.1-201ENST00000427470 102 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 ZYG11AP1-201ENST00000430329 837 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC098826.1-201ENST00000433943 471 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 AL591503.2-201ENST00000442314 1005 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCN3P51790 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCN3P51790 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCN3P51790 snoU13.3-201ENST00000459441 104 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC092754.2-201ENST00000463506 460 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC008155.2-201ENST00000464337 397 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 RPS4XP10-201ENST00000465034 731 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCN3P51790 SETP11-201ENST00000473027 690 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 SYPL1P1-201ENST00000473622 768 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCN3P51790 AC080014.1-201ENST00000496877 1201 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 OR7K1P-201ENST00000546439 926 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 AL360157.1-201ENST00000565962 87 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 AC011260.1-201ENST00000578420 472 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 MIR3915-201ENST00000578518 97 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 MAGOH2P-202ENST00000584384 429 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 AC006077.1-201ENST00000604746 343 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCN3P51790 AL357080.1-201ENST00000617394 239 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AL359715.5-201ENST00000623431 443 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC079228.1-201ENST00000624774 1049 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 CR381572.1-201ENST00000625098 102 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCN3P51790 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCN3P51790 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCN3P51790 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCN3P51790 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCN3P51790 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCN3P51790 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCN3P51790 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCN3P51790 AL390237.1-201ENST00000404226 1415 ntBASIC3.95□□□□□ -1.78
CLCN3P51790 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLCN3P51790 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.94□□□□□ -1.78
CLCN3P51790 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLCN3P51790 RNU6-623P-201ENST00000363143 105 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 RNA5SP50-201ENST00000363731 107 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 RNA5SP72-201ENST00000364442 117 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 RNU6-253P-201ENST00000384730 105 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.94□□□□□ -1.78
CLCN3P51790 HSPE1P8-201ENST00000406997 288 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCN3P51790 RPS15AP38-201ENST00000413110 372 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 TPMTP2-201ENST00000414372 726 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 FNDC3CP-201ENST00000420795 1155 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms