Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.76□□□□□ -1.97
CX3CR1P49238 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.76□□□□□ -1.97
CX3CR1P49238 OR1S2-201ENST00000302592 978 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CX3CR1P49238 RNU6-1155P-201ENST00000363554 107 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 RNU6-1300P-201ENST00000391046 108 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 TAF9BP1-201ENST00000396646 746 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AL355615.1-201ENST00000406187 641 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.76□□□□□ -1.97
CX3CR1P49238 RNU2-47P-201ENST00000410649 186 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 RN7SKP123-201ENST00000410732 291 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AC069157.1-201ENST00000421749 137 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 DPPA2P1-201ENST00000428060 556 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.76□□□□□ -1.97
CX3CR1P49238 OR2B8P-201ENST00000432841 938 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.76□□□□□ -1.97
CX3CR1P49238 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.76□□□□□ -1.97
CX3CR1P49238 CDC27P1-201ENST00000445384 715 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AL590664.1-201ENST00000448065 339 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AC093392.2-201ENST00000450682 337 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 Z82190.1-201ENST00000454534 490 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AL359385.1-201ENST00000456509 365 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AC092757.1-201ENST00000467293 467 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AC110794.1-201ENST00000505816 425 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AC118282.1-201ENST00000506408 765 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.76□□□□□ -1.97
CX3CR1P49238 FAM60DP-201ENST00000524174 632 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.76□□□□□ -1.97
CX3CR1P49238 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CX3CR1P49238 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.76□□□□□ -1.97
CX3CR1P49238 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.76□□□□□ -1.97
CX3CR1P49238 RPL21P12-201ENST00000559810 515 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AC012443.1-201ENST00000605605 231 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AP001521.1-201ENST00000609150 300 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AC091046.2-201ENST00000620775 665 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 AL356585.4-201ENST00000623078 1229 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 MTCO1P12-201ENST00000414273 1543 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.76□□□□□ -1.97
CX3CR1P49238 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.76□□□□□ -1.97
CX3CR1P49238 AC103988.1-201ENST00000566382 2177 ntBASIC2.76□□□□□ -1.97
CX3CR1P49238 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CX3CR1P49238 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.75□□□□□ -1.97
CX3CR1P49238 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CX3CR1P49238 SUGT1P1-201ENST00000379514 476 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.75□□□□□ -1.97
CX3CR1P49238 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CX3CR1P49238 RPL23AP69-201ENST00000431134 458 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.75□□□□□ -1.97
CX3CR1P49238 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.75□□□□□ -1.97
CX3CR1P49238 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.75□□□□□ -1.97
CX3CR1P49238 RPL21P133-201ENST00000443666 476 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 Z95327.1-201ENST00000446082 482 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 AL031183.1-201ENST00000457667 207 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 AC091179.1-201ENST00000461606 579 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 KLRA1P-201ENST00000503499 986 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 SNORA70.16-201ENST00000516390 95 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 AC027309.2-201ENST00000520566 192 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.75□□□□□ -1.97
CX3CR1P49238 OR5AK1P-201ENST00000524837 922 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.75□□□□□ -1.97
CX3CR1P49238 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.75□□□□□ -1.97
CX3CR1P49238 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CX3CR1P49238 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.75□□□□□ -1.97
CX3CR1P49238 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.75□□□□□ -1.97
CX3CR1P49238 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.75□□□□□ -1.97
CX3CR1P49238 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.75□□□□□ -1.97
CX3CR1P49238 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.75□□□□□ -1.97
CX3CR1P49238 CKS1BP3-201ENST00000600888 237 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 RPL23AP92-201ENST00000603609 255 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 AC004832.5-201ENST00000608677 401 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.75□□□□□ -1.97
CX3CR1P49238 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CX3CR1P49238 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.75□□□□□ -1.97
CX3CR1P49238 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.75□□□□□ -1.97
CX3CR1P49238 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.74□□□□□ -1.97
CX3CR1P49238 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CX3CR1P49238 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.74□□□□□ -1.97
CX3CR1P49238 RNU5B-4P-201ENST00000363508 111 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 SNORA1.3-201ENST00000384676 136 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 RNA5SP252-201ENST00000391131 119 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 AL603865.2-201ENST00000401679 213 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 RNA5SP344-201ENST00000411081 104 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 AL024507.1-201ENST00000412741 274 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CR1P49238 AL137014.1-201ENST00000420490 1226 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CR1P49238 AC013262.1-201ENST00000426710 252 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 AC092634.2-201ENST00000428146 1010 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms