Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL18A1P39060 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL18A1P39060 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
COL18A1P39060 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.84□□□□□ -1.95
COL18A1P39060 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.84□□□□□ -1.95
COL18A1P39060 RPL36AP6-201ENST00000435770 321 ntBASIC2.84□□□□□ -1.95
COL18A1P39060 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.84□□□□□ -1.95
COL18A1P39060 AC108729.3-201ENST00000513484 108 ntBASIC2.84□□□□□ -1.95
COL18A1P39060 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.84□□□□□ -1.95
COL18A1P39060 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.84□□□□□ -1.95
COL18A1P39060 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.84□□□□□ -1.95
COL18A1P39060 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.84□□□□□ -1.95
COL18A1P39060 YWHAEP7-203ENST00000622054 312 ntBASIC2.84□□□□□ -1.95
COL18A1P39060 AC119674.1-220ENST00000641502 1048 ntBASIC2.84□□□□□ -1.95
COL18A1P39060 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL18A1P39060 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
COL18A1P39060 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
COL18A1P39060 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
COL18A1P39060 AL359893.1-201ENST00000447628 1580 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.84□□□□□ -1.96
COL18A1P39060 RNU6-317P-201ENST00000384031 107 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 RNU4-31P-201ENST00000384211 141 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
COL18A1P39060 CYCSP49-201ENST00000420810 319 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 AL445646.1-201ENST00000431784 216 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.84□□□□□ -1.96
COL18A1P39060 RPL23AP62-201ENST00000463396 453 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 AC072039.1-201ENST00000477611 581 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 AC023050.1-201ENST00000498198 304 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 SCARNA17.1-201ENST00000516211 143 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 SCARNA17.2-201ENST00000516334 143 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.84□□□□□ -1.96
COL18A1P39060 AL161713.1-201ENST00000555538 145 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 AC009268.1-201ENST00000561352 1203 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 TPMTP1-201ENST00000592307 737 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 AC135803.1-201ENST00000608748 565 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 AC107294.3-201ENST00000609211 526 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 SCARNA17.4-201ENST00000614296 143 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 AC004943.3-201ENST00000624116 600 ntBASIC2.84□□□□□ -1.96
COL18A1P39060 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
COL18A1P39060 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
COL18A1P39060 SNORA48.3-201ENST00000391081 134 ntBASIC2.83□□□□□ -1.96
COL18A1P39060 Z85994.2-201ENST00000434327 452 ntBASIC2.83□□□□□ -1.96
COL18A1P39060 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.83□□□□□ -1.96
COL18A1P39060 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.83□□□□□ -1.96
COL18A1P39060 OR4R2P-201ENST00000530815 597 ntBASIC2.83□□□□□ -1.96
COL18A1P39060 AC090695.1-201ENST00000561269 1222 ntBASIC2.83□□□□□ -1.96
COL18A1P39060 MIR4458-201ENST00000578872 75 ntBASIC2.83□□□□□ -1.96
COL18A1P39060 MIR8070-201ENST00000616510 88 ntBASIC2.83□□□□□ -1.96
COL18A1P39060 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL18A1P39060 MTND5P27-201ENST00000428871 1720 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL18A1P39060 EXOC5P1-201ENST00000510543 1969 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.82□□□□□ -1.96
COL18A1P39060 AL159169.1-201ENST00000421119 127 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 NDUFA5P10-201ENST00000432147 357 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 TPMTP4-201ENST00000450749 678 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 AC091917.2-201ENST00000505002 744 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.82□□□□□ -1.96
COL18A1P39060 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.82□□□□□ -1.96
COL18A1P39060 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL18A1P39060 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.82□□□□□ -1.96
COL18A1P39060 AP003117.2-201ENST00000606010 545 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.82□□□□□ -1.96
COL18A1P39060 CYP3A51P-201ENST00000633513 256 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL18A1P39060 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
COL18A1P39060 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.82□□□□□ -1.96
COL18A1P39060 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL18A1P39060 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
COL18A1P39060 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.82□□□□□ -1.96
COL18A1P39060 SNORA26.9-201ENST00000391322 122 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL18A1P39060 NPM1P10-201ENST00000398310 865 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 RNU6-321P-201ENST00000410912 106 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 GAPDHP27-201ENST00000447427 1020 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 RPL36AP21-201ENST00000490372 323 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 GNAI2P1-201ENST00000541815 315 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 AL049870.4-201ENST00000555741 486 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 AGGF1P8-201ENST00000562979 1000 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 AC023043.2-201ENST00000589678 1026 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 AC083899.3-201ENST00000603413 594 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 AC055764.2-201ENST00000610089 670 ntBASIC2.82□□□□□ -1.96
COL18A1P39060 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL18A1P39060 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL18A1P39060 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL18A1P39060 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL18A1P39060 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL18A1P39060 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.81□□□□□ -1.96
COL18A1P39060 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.81□□□□□ -1.96
COL18A1P39060 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.81□□□□□ -1.96
COL18A1P39060 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.81□□□□□ -1.96
COL18A1P39060 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
COL18A1P39060 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.81□□□□□ -1.96
COL18A1P39060 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.81□□□□□ -1.96
COL18A1P39060 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.81□□□□□ -1.96
COL18A1P39060 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.81□□□□□ -1.96
COL18A1P39060 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms