Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.87□□□□□ -1.79
PCNAP12004 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PCNAP12004 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.87□□□□□ -1.79
PCNAP12004 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCNAP12004 RNU6-853P-201ENST00000364306 107 ntBASIC3.87□□□□□ -1.79
PCNAP12004 RNU4-75P-201ENST00000364621 146 ntBASIC3.87□□□□□ -1.79
PCNAP12004 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.87□□□□□ -1.79
PCNAP12004 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.87□□□□□ -1.79
PCNAP12004 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.87□□□□□ -1.79
PCNAP12004 MTCO2P34-201ENST00000421994 607 ntBASIC3.87□□□□□ -1.79
PCNAP12004 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCNAP12004 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.87□□□□□ -1.79
PCNAP12004 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.87□□□□□ -1.79
PCNAP12004 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.87□□□□□ -1.79
PCNAP12004 MTND1P28-201ENST00000435623 950 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AL356535.1-201ENST00000440335 398 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.87□□□□□ -1.79
PCNAP12004 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
PCNAP12004 RPS20P32-201ENST00000456044 356 ntBASIC3.87□□□□□ -1.79
PCNAP12004 MTCO1P42-201ENST00000457379 726 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AC010618.1-201ENST00000469924 477 ntBASIC3.87□□□□□ -1.79
PCNAP12004 RN7SL860P-201ENST00000473738 223 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AC093267.1-201ENST00000489176 961 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AP001025.2-201ENST00000490908 477 ntBASIC3.87□□□□□ -1.79
PCNAP12004 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.87□□□□□ -1.79
PCNAP12004 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.87□□□□□ -1.79
PCNAP12004 AC091435.1-201ENST00000505442 584 ntBASIC3.87□□□□□ -1.79
PCNAP12004 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.87□□□□□ -1.79
PCNAP12004 RNU4-60P-201ENST00000517239 135 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.87□□□□□ -1.79
PCNAP12004 AP002748.2-201ENST00000528671 348 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AP003385.6-201ENST00000531603 374 ntBASIC3.87□□□□□ -1.79
PCNAP12004 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.87□□□□□ -1.79
PCNAP12004 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCNAP12004 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.87□□□□□ -1.79
PCNAP12004 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.87□□□□□ -1.79
PCNAP12004 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCNAP12004 RN7SL600P-201ENST00000581811 299 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AC068276.1-201ENST00000605793 379 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AC025594.3-201ENST00000613068 790 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AC011939.3-201ENST00000613686 466 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AC092140.2-201ENST00000618027 521 ntBASIC3.87□□□□□ -1.79
PCNAP12004 U7.8-201ENST00000619968 63 ntBASIC3.87□□□□□ -1.79
PCNAP12004 AC009878.1-201ENST00000621819 340 ntBASIC3.87□□□□□ -1.79
PCNAP12004 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCNAP12004 AL353746.1-201ENST00000566293 6881 ntBASIC3.87□□□□□ -1.79
PCNAP12004 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCNAP12004 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCNAP12004 AC005183.1-201ENST00000603687 1979 ntBASIC3.87□□□□□ -1.79
PCNAP12004 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
PCNAP12004 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PCNAP12004 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCNAP12004 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PCNAP12004 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCNAP12004 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCNAP12004 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCNAP12004 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.86□□□□□ -1.79
PCNAP12004 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.86□□□□□ -1.79
PCNAP12004 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
PCNAP12004 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCNAP12004 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCNAP12004 AC116096.1-201ENST00000566804 2314 ntBASIC3.86□□□□□ -1.79
PCNAP12004 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCNAP12004 AC126755.2-208ENST00000327792 462 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC138969.1-213ENST00000331436 462 ntBASIC3.86□□□□□ -1.79
PCNAP12004 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCNAP12004 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCNAP12004 MIR1305-201ENST00000408300 86 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC245052.5-201ENST00000416320 649 ntBASIC3.86□□□□□ -1.79
PCNAP12004 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.86□□□□□ -1.79
PCNAP12004 AC006366.1-201ENST00000422002 759 ntBASIC3.86□□□□□ -1.79
PCNAP12004 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.86□□□□□ -1.79
PCNAP12004 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.86□□□□□ -1.79
PCNAP12004 MRPS18BP2-201ENST00000434310 759 ntBASIC3.86□□□□□ -1.79
PCNAP12004 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.86□□□□□ -1.79
PCNAP12004 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.86□□□□□ -1.79
PCNAP12004 RPL7P36-201ENST00000444633 681 ntBASIC3.86□□□□□ -1.79
PCNAP12004 USP9YP29-201ENST00000445112 563 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AL353691.1-201ENST00000451332 387 ntBASIC3.86□□□□□ -1.79
PCNAP12004 MTCO2P18-201ENST00000457151 658 ntBASIC3.86□□□□□ -1.79
PCNAP12004 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.86□□□□□ -1.79
PCNAP12004 RNU6-956P-201ENST00000458868 103 ntBASIC3.86□□□□□ -1.79
PCNAP12004 HMGB1P25-201ENST00000468402 607 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC104563.1-201ENST00000476147 376 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC026979.1-201ENST00000492525 396 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.86□□□□□ -1.79
PCNAP12004 MTCO3P7-201ENST00000510008 774 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC010625.1-201ENST00000511296 403 ntBASIC3.86□□□□□ -1.79
PCNAP12004 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.86□□□□□ -1.79
PCNAP12004 MTND4LP18-201ENST00000526864 291 ntBASIC3.86□□□□□ -1.79
PCNAP12004 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.86□□□□□ -1.79
PCNAP12004 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.86□□□□□ -1.79
PCNAP12004 EEF1B2P4-201ENST00000551398 348 ntBASIC3.86□□□□□ -1.79
PCNAP12004 AC024909.2-201ENST00000553035 286 ntBASIC3.86□□□□□ -1.79
PCNAP12004 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.86□□□□□ -1.79
PCNAP12004 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.86□□□□□ -1.79
PCNAP12004 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.86□□□□□ -1.79
PCNAP12004 AC022968.1-201ENST00000567372 442 ntBASIC3.86□□□□□ -1.79
PCNAP12004 MIR5697-201ENST00000578045 78 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms