Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD48P09326 RNU6-1122P-201ENST00000384449 107 ntBASIC3.57□□□□□ -1.84
CD48P09326 RNU6-178P-201ENST00000384631 104 ntBASIC3.57□□□□□ -1.84
CD48P09326 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CD48P09326 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CD48P09326 AL445189.1-201ENST00000405722 338 ntBASIC3.57□□□□□ -1.84
CD48P09326 RNU6ATAC-201ENST00000408749 126 ntBASIC3.57□□□□□ -1.84
CD48P09326 RNA5SP239-201ENST00000410218 129 ntBASIC3.57□□□□□ -1.84
CD48P09326 RPL7P8-201ENST00000411964 730 ntBASIC3.57□□□□□ -1.84
CD48P09326 RPS7P13-201ENST00000413955 498 ntBASIC3.57□□□□□ -1.84
CD48P09326 Z99755.1-201ENST00000414048 380 ntBASIC3.57□□□□□ -1.84
CD48P09326 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.57□□□□□ -1.84
CD48P09326 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.57□□□□□ -1.84
CD48P09326 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.57□□□□□ -1.84
CD48P09326 AL031736.2-201ENST00000426573 787 ntBASIC3.57□□□□□ -1.84
CD48P09326 AP000907.1-201ENST00000428428 510 ntBASIC3.57□□□□□ -1.84
CD48P09326 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD48P09326 MED14P1-201ENST00000430517 648 ntBASIC3.57□□□□□ -1.84
CD48P09326 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.57□□□□□ -1.84
CD48P09326 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.57□□□□□ -1.84
CD48P09326 AL365440.1-201ENST00000436135 2167 ntBASIC3.57□□□□□ -1.84
CD48P09326 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.57□□□□□ -1.84
CD48P09326 AL353706.1-201ENST00000436728 494 ntBASIC3.57□□□□□ -1.84
CD48P09326 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.57□□□□□ -1.84
CD48P09326 MTND5P24-201ENST00000438892 1767 ntBASIC3.57□□□□□ -1.84
CD48P09326 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.57□□□□□ -1.84
CD48P09326 TRGVB-201ENST00000453257 471 ntBASIC3.57□□□□□ -1.84
CD48P09326 AC006539.3-201ENST00000454258 129 ntBASIC3.57□□□□□ -1.84
CD48P09326 AL049830.2-201ENST00000480072 201 ntBASIC3.57□□□□□ -1.84
CD48P09326 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.57□□□□□ -1.84
CD48P09326 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.57□□□□□ -1.84
CD48P09326 MTND4P2-201ENST00000507767 1203 ntBASIC3.57□□□□□ -1.84
CD48P09326 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.57□□□□□ -1.84
CD48P09326 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.57□□□□□ -1.84
CD48P09326 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.57□□□□□ -1.84
CD48P09326 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.57□□□□□ -1.84
CD48P09326 SNORA70.19-201ENST00000516717 90 ntBASIC3.57□□□□□ -1.84
CD48P09326 AC023632.4-201ENST00000517783 191 ntBASIC3.57□□□□□ -1.84
CD48P09326 DEFB131D-201ENST00000526803 184 ntBASIC3.57□□□□□ -1.84
CD48P09326 DEFB109D-201ENST00000529497 240 ntBASIC3.57□□□□□ -1.84
CD48P09326 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.57□□□□□ -1.84
CD48P09326 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD48P09326 AC090502.2-201ENST00000549267 280 ntBASIC3.57□□□□□ -1.84
CD48P09326 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD48P09326 SULT1C2P1-202ENST00000562418 459 ntBASIC3.57□□□□□ -1.84
CD48P09326 EIF5A2P1-201ENST00000564027 460 ntBASIC3.57□□□□□ -1.84
CD48P09326 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.57□□□□□ -1.84
CD48P09326 AC136618.2-201ENST00000575091 400 ntBASIC3.57□□□□□ -1.84
CD48P09326 AC073544.2-201ENST00000601155 540 ntBASIC3.57□□□□□ -1.84
CD48P09326 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.57□□□□□ -1.84
CD48P09326 AL596327.1-201ENST00000603629 213 ntBASIC3.57□□□□□ -1.84
CD48P09326 MTCYBP22-201ENST00000603788 447 ntBASIC3.57□□□□□ -1.84
CD48P09326 AC106028.5-201ENST00000610332 395 ntBASIC3.57□□□□□ -1.84
CD48P09326 AC032011.1-201ENST00000611703 1549 ntBASIC3.57□□□□□ -1.84
CD48P09326 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD48P09326 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.57□□□□□ -1.84
CD48P09326 AL034408.1-202ENST00000636088 415 ntBASIC3.57□□□□□ -1.84
CD48P09326 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CD48P09326 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD48P09326 SAGE4P-201ENST00000442271 3381 ntBASIC3.57□□□□□ -1.84
CD48P09326 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CD48P09326 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CD48P09326 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD48P09326 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.56□□□□□ -1.84
CD48P09326 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CD48P09326 DDX43P2-201ENST00000604753 1354 ntBASIC3.56□□□□□ -1.84
CD48P09326 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CD48P09326 RNA5SP197-201ENST00000363357 119 ntBASIC3.56□□□□□ -1.84
CD48P09326 Y_RNA.302-201ENST00000364997 102 ntBASIC3.56□□□□□ -1.84
CD48P09326 SNORD17-201ENST00000390930 237 ntBASIC3.56□□□□□ -1.84
CD48P09326 RN7SKP177-201ENST00000410567 355 ntBASIC3.56□□□□□ -1.84
CD48P09326 AL953862.1-201ENST00000423016 168 ntBASIC3.56□□□□□ -1.84
CD48P09326 AL049610.1-201ENST00000423374 372 ntBASIC3.56□□□□□ -1.84
CD48P09326 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.56□□□□□ -1.84
CD48P09326 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.56□□□□□ -1.84
CD48P09326 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.56□□□□□ -1.84
CD48P09326 AC018644.1-201ENST00000429934 551 ntBASIC3.56□□□□□ -1.84
CD48P09326 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.56□□□□□ -1.84
CD48P09326 AC023347.2-201ENST00000433994 462 ntBASIC3.56□□□□□ -1.84
CD48P09326 MTND1P30-201ENST00000441241 901 ntBASIC3.56□□□□□ -1.84
CD48P09326 COX6CP2-201ENST00000444980 225 ntBASIC3.56□□□□□ -1.84
CD48P09326 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.56□□□□□ -1.84
CD48P09326 AL133547.1-201ENST00000448546 220 ntBASIC3.56□□□□□ -1.84
CD48P09326 RN7SL330P-201ENST00000469709 307 ntBASIC3.56□□□□□ -1.84
CD48P09326 RPL30P11-201ENST00000495304 339 ntBASIC3.56□□□□□ -1.84
CD48P09326 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CD48P09326 IGKV2-23-201ENST00000518729 323 ntBASIC3.56□□□□□ -1.84
CD48P09326 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.56□□□□□ -1.84
CD48P09326 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.56□□□□□ -1.84
CD48P09326 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.56□□□□□ -1.84
CD48P09326 AC103843.2-201ENST00000530523 682 ntBASIC3.56□□□□□ -1.84
CD48P09326 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.56□□□□□ -1.84
CD48P09326 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.56□□□□□ -1.84
CD48P09326 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.56□□□□□ -1.84
CD48P09326 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
CD48P09326 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.56□□□□□ -1.84
CD48P09326 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.56□□□□□ -1.84
CD48P09326 AC018552.3-201ENST00000567416 561 ntBASIC3.56□□□□□ -1.84
CD48P09326 AC012435.1-202ENST00000568772 240 ntBASIC3.56□□□□□ -1.84
CD48P09326 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms