Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.41□□□□□ -1.86
SNX3O60493 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX3O60493 AP001350.1-201ENST00000601906 1524 ntBASIC3.41□□□□□ -1.86
SNX3O60493 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNX3O60493 MFSD8-233ENST00000641482 4860 ntBASIC3.41□□□□□ -1.86
SNX3O60493 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.41□□□□□ -1.86
SNX3O60493 SNORA31-201ENST00000362607 130 ntBASIC3.41□□□□□ -1.86
SNX3O60493 RNA5SP189-201ENST00000364920 115 ntBASIC3.41□□□□□ -1.86
SNX3O60493 MIR607-201ENST00000385241 96 ntBASIC3.41□□□□□ -1.86
SNX3O60493 SNORA3.3-201ENST00000408712 125 ntBASIC3.41□□□□□ -1.86
SNX3O60493 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX3O60493 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.41□□□□□ -1.86
SNX3O60493 RPL36AP36-201ENST00000418616 301 ntBASIC3.41□□□□□ -1.86
SNX3O60493 AC012498.1-201ENST00000424037 437 ntBASIC3.41□□□□□ -1.86
SNX3O60493 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.41□□□□□ -1.86
SNX3O60493 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 MTND1P26-201ENST00000440488 538 ntBASIC3.41□□□□□ -1.86
SNX3O60493 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.41□□□□□ -1.86
SNX3O60493 AL133217.1-201ENST00000450980 425 ntBASIC3.41□□□□□ -1.86
SNX3O60493 RPS24P6-201ENST00000452670 400 ntBASIC3.41□□□□□ -1.86
SNX3O60493 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 RPL31P13-201ENST00000484151 370 ntBASIC3.41□□□□□ -1.86
SNX3O60493 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.41□□□□□ -1.86
SNX3O60493 RNU6-1095P-201ENST00000516148 108 ntBASIC3.41□□□□□ -1.86
SNX3O60493 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 OR5D17P-201ENST00000531492 978 ntBASIC3.41□□□□□ -1.86
SNX3O60493 AC109635.4-202ENST00000531666 412 ntBASIC3.41□□□□□ -1.86
SNX3O60493 AC084824.1-201ENST00000550917 1005 ntBASIC3.41□□□□□ -1.86
SNX3O60493 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.41□□□□□ -1.86
SNX3O60493 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.41□□□□□ -1.86
SNX3O60493 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX3O60493 AC136618.2-201ENST00000575091 400 ntBASIC3.41□□□□□ -1.86
SNX3O60493 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX3O60493 AC090186.1-201ENST00000605991 572 ntBASIC3.41□□□□□ -1.86
SNX3O60493 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.41□□□□□ -1.86
SNX3O60493 AL356585.4-201ENST00000623078 1229 ntBASIC3.41□□□□□ -1.86
SNX3O60493 AP003355.3-201ENST00000623465 114 ntBASIC3.41□□□□□ -1.86
SNX3O60493 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX3O60493 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX3O60493 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX3O60493 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNX3O60493 AC017071.1-201ENST00000564407 2204 ntBASIC3.41□□□□□ -1.86
SNX3O60493 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.41□□□□□ -1.86
SNX3O60493 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX3O60493 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.4□□□□□ -1.86
SNX3O60493 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.4□□□□□ -1.86
SNX3O60493 AC032011.1-201ENST00000611703 1549 ntBASIC3.4□□□□□ -1.86
SNX3O60493 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SNX3O60493 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SNX3O60493 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SNX3O60493 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SNX3O60493 Y_RNA.18-201ENST00000362461 102 ntBASIC3.4□□□□□ -1.87
SNX3O60493 RNU6-600P-201ENST00000362524 99 ntBASIC3.4□□□□□ -1.87
SNX3O60493 Y_RNA.302-201ENST00000364997 102 ntBASIC3.4□□□□□ -1.87
SNX3O60493 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNX3O60493 RNU6-213P-201ENST00000384051 104 ntBASIC3.4□□□□□ -1.87
SNX3O60493 Y_RNA.548-201ENST00000384656 105 ntBASIC3.4□□□□□ -1.87
SNX3O60493 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SNX3O60493 U3.22-201ENST00000391120 215 ntBASIC3.4□□□□□ -1.87
SNX3O60493 RPL7P60-201ENST00000397636 735 ntBASIC3.4□□□□□ -1.87
SNX3O60493 MIR320C1-201ENST00000408566 88 ntBASIC3.4□□□□□ -1.87
SNX3O60493 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
SNX3O60493 MTCO3P12-201ENST00000416718 547 ntBASIC3.4□□□□□ -1.87
SNX3O60493 AL356095.1-201ENST00000417217 199 ntBASIC3.4□□□□□ -1.87
SNX3O60493 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX3O60493 AC245028.1-201ENST00000423259 256 ntBASIC3.4□□□□□ -1.87
SNX3O60493 AC079780.1-201ENST00000428259 207 ntBASIC3.4□□□□□ -1.87
SNX3O60493 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX3O60493 RPS6P15-201ENST00000431996 751 ntBASIC3.4□□□□□ -1.87
SNX3O60493 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SNX3O60493 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX3O60493 LSM1P1-201ENST00000438629 273 ntBASIC3.4□□□□□ -1.87
SNX3O60493 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.4□□□□□ -1.87
SNX3O60493 AC008264.1-201ENST00000447612 367 ntBASIC3.4□□□□□ -1.87
SNX3O60493 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX3O60493 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.4□□□□□ -1.87
SNX3O60493 AC097262.1-201ENST00000452559 548 ntBASIC3.4□□□□□ -1.87
SNX3O60493 RNU7-125P-201ENST00000458760 62 ntBASIC3.4□□□□□ -1.87
SNX3O60493 AC006463.2-201ENST00000473326 348 ntBASIC3.4□□□□□ -1.87
SNX3O60493 RN7SL283P-201ENST00000489055 303 ntBASIC3.4□□□□□ -1.87
SNX3O60493 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX3O60493 AC010486.2-201ENST00000505572 483 ntBASIC3.4□□□□□ -1.87
SNX3O60493 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.4□□□□□ -1.87
SNX3O60493 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX3O60493 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.4□□□□□ -1.87
SNX3O60493 RN7SKP244-201ENST00000516513 307 ntBASIC3.4□□□□□ -1.87
SNX3O60493 RNA5SP309-201ENST00000516670 106 ntBASIC3.4□□□□□ -1.87
SNX3O60493 RNU6-1073P-201ENST00000517182 106 ntBASIC3.4□□□□□ -1.87
SNX3O60493 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SNX3O60493 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX3O60493 CR383656.7-201ENST00000548164 174 ntBASIC3.4□□□□□ -1.87
SNX3O60493 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX3O60493 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms