Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 SNORA57.3-201ENST00000411095 141 ntBASIC3.51□□□□□ -1.85
PRKNO60260 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 JKAMPP1-201ENST00000413804 919 ntBASIC3.51□□□□□ -1.85
PRKNO60260 RAC1P3-201ENST00000416129 580 ntBASIC3.51□□□□□ -1.85
PRKNO60260 MTCO1P21-201ENST00000416634 589 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 GLRXP1-201ENST00000423261 334 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC008065.1-201ENST00000428525 348 ntBASIC3.51□□□□□ -1.85
PRKNO60260 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 OR51AB1P-201ENST00000429046 620 ntBASIC3.51□□□□□ -1.85
PRKNO60260 GOT2P5-201ENST00000433995 546 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 RPL37P21-201ENST00000435890 276 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKNO60260 AC002381.1-201ENST00000447049 280 ntBASIC3.51□□□□□ -1.85
PRKNO60260 ELOCP30-201ENST00000447108 299 ntBASIC3.51□□□□□ -1.85
PRKNO60260 HMGB3P22-202ENST00000451823 572 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKNO60260 AL133162.1-201ENST00000463228 453 ntBASIC3.51□□□□□ -1.85
PRKNO60260 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 AC084198.1-201ENST00000477747 402 ntBASIC3.51□□□□□ -1.85
PRKNO60260 HMGB1P36-201ENST00000487709 576 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC139783.2-201ENST00000504847 1145 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 AC109458.1-201ENST00000508858 316 ntBASIC3.51□□□□□ -1.85
PRKNO60260 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PRKNO60260 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 SNORA67.7-201ENST00000516664 135 ntBASIC3.51□□□□□ -1.85
PRKNO60260 IGHV3-32-201ENST00000519182 355 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PRKNO60260 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKNO60260 AP002963.1-201ENST00000530590 184 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AL139174.1-201ENST00000531489 886 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC008011.1-201ENST00000545989 227 ntBASIC3.51□□□□□ -1.85
PRKNO60260 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.51□□□□□ -1.85
PRKNO60260 AL391156.1-201ENST00000554965 554 ntBASIC3.51□□□□□ -1.85
PRKNO60260 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKNO60260 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKNO60260 MIR3158-1-201ENST00000583596 81 ntBASIC3.51□□□□□ -1.85
PRKNO60260 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.51□□□□□ -1.85
PRKNO60260 AC112230.1-201ENST00000604342 547 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC090186.1-201ENST00000605991 572 ntBASIC3.51□□□□□ -1.85
PRKNO60260 SNORA62.6-201ENST00000606322 83 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC080013.4-201ENST00000607624 649 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC100793.4-201ENST00000613683 429 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC004825.2-201ENST00000616634 455 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC006133.1-201ENST00000617106 264 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AL590240.3-201ENST00000621416 943 ntBASIC3.51□□□□□ -1.85
PRKNO60260 CR392039.5-201ENST00000623201 510 ntBASIC3.51□□□□□ -1.85
PRKNO60260 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKNO60260 AC093591.3-201ENST00000634516 308 ntBASIC3.51□□□□□ -1.85
PRKNO60260 AC012442.3-202ENST00000636742 206 ntBASIC3.51□□□□□ -1.85
PRKNO60260 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PRKNO60260 AC024560.2-201ENST00000507981 1497 ntBASIC3.51□□□□□ -1.85
PRKNO60260 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRKNO60260 AC011978.2-201ENST00000569835 2054 ntBASIC3.51□□□□□ -1.85
PRKNO60260 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKNO60260 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRKNO60260 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PRKNO60260 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PRKNO60260 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.5□□□□□ -1.85
PRKNO60260 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PRKNO60260 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
PRKNO60260 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PRKNO60260 RNU6-343P-201ENST00000364709 104 ntBASIC3.5□□□□□ -1.85
PRKNO60260 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 SNORA75-201ENST00000384158 137 ntBASIC3.5□□□□□ -1.85
PRKNO60260 RNU6-1119P-201ENST00000384349 108 ntBASIC3.5□□□□□ -1.85
PRKNO60260 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.5□□□□□ -1.85
PRKNO60260 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.5□□□□□ -1.85
PRKNO60260 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.5□□□□□ -1.85
PRKNO60260 AL391219.1-201ENST00000422570 483 ntBASIC3.5□□□□□ -1.85
PRKNO60260 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.5□□□□□ -1.85
PRKNO60260 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PRKNO60260 AC018644.1-201ENST00000429934 551 ntBASIC3.5□□□□□ -1.85
PRKNO60260 USP9YP14-201ENST00000430663 563 ntBASIC3.5□□□□□ -1.85
PRKNO60260 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.5□□□□□ -1.85
PRKNO60260 HSPE1P28-201ENST00000443139 211 ntBASIC3.5□□□□□ -1.85
PRKNO60260 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.5□□□□□ -1.85
PRKNO60260 Z95327.1-201ENST00000446082 482 ntBASIC3.5□□□□□ -1.85
PRKNO60260 SSXP1-201ENST00000453640 473 ntBASIC3.5□□□□□ -1.85
PRKNO60260 OR6K1P-201ENST00000456766 971 ntBASIC3.5□□□□□ -1.85
PRKNO60260 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms