Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 OR2AS1P-201ENST00000427827 319 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AL450023.3-201ENST00000440592 271 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AC016691.1-201ENST00000441321 413 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 RPS11P1-201ENST00000451072 473 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 RN7SL197P-201ENST00000466981 299 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AC008628.2-201ENST00000502605 298 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 Y_RNA.702-201ENST00000516843 96 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 HMGB1P19-201ENST00000517578 577 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AP003072.2-201ENST00000527756 676 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AF038458.1-201ENST00000588406 262 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AP002360.3-201ENST00000607673 710 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 FAM91A3P-201ENST00000456826 2544 ntBASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC163A0A0D9SF12 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 RNU6-1155P-201ENST00000363554 107 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 RNU6-188P-201ENST00000364207 107 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 RNA5SP479-201ENST00000364858 117 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 Y_RNA.367-201ENST00000365544 101 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 SNORA57.1-201ENST00000391227 145 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 FGF7P8-201ENST00000402994 292 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 RNU6-908P-201ENST00000410160 94 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 OR9R1P-201ENST00000412200 877 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC005094.1-201ENST00000440420 368 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 RNU6-261P-201ENST00000459506 102 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC091153.1-201ENST00000466297 402 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC233702.1-201ENST00000482905 502 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 HSPD1P15-201ENST00000505573 1122 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 RNU1-6P-201ENST00000516290 144 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 OR5B10P-201ENST00000532869 642 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC090616.5-202ENST00000582111 297 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AP001029.3-201ENST00000588063 596 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC008945.2-201ENST00000606056 604 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 TUG1_2.1-201ENST00000614234 87 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC024940.5-201ENST00000622889 474 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 FRG1KP-201ENST00000623592 341 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 AC067931.1-201ENST00000624190 671 ntBASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CCDC163A0A0D9SF12 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CCDC163A0A0D9SF12 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC163A0A0D9SF12 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC163A0A0D9SF12 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC163A0A0D9SF12 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC163A0A0D9SF12 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC163A0A0D9SF12 AC125257.1-201ENST00000560400 2930 ntBASIC4.84□□□□□ -1.63
CCDC163A0A0D9SF12 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC163A0A0D9SF12 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC163A0A0D9SF12 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC163A0A0D9SF12 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms