Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC008628.1-201ENST00000508663 265 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 CCNG2P1-201ENST00000549521 1000 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 CYB5AP5-201ENST00000549779 389 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AC138932.5-201ENST00000617759 563 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AC022509.4-201ENST00000621404 572 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AL356094.1-201ENST00000624663 1212 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 HMGB1P5-201ENST00000255320 642 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 U3.19-201ENST00000390893 196 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AL355615.1-201ENST00000406187 641 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 RNU4-47P-201ENST00000410876 114 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC245054.2-201ENST00000415639 319 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 RPL7P30-201ENST00000420888 709 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC092393.1-201ENST00000439625 742 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 PRDX3P3-201ENST00000447765 522 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 UQCRHP3-201ENST00000451503 251 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 RPS4XP10-201ENST00000465034 731 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC091153.1-201ENST00000466297 402 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 snoZ278.1-201ENST00000517059 112 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 ELOCP35-201ENST00000604289 336 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC231759.1-201ENST00000616455 597 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 AC091046.2-201ENST00000620775 665 ntBASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRC40Q9H9A6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 RNU6-878P-201ENST00000384578 110 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 SNORA1.3-201ENST00000384676 136 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC110754.1-201ENST00000399740 601 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 MTATP6P11-201ENST00000428071 670 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 PSMA6P3-201ENST00000428242 164 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC005300.1-201ENST00000428401 373 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC005326.1-201ENST00000429197 123 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC006028.1-201ENST00000438379 402 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 Z75741.1-201ENST00000446793 314 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 VN1R34P-201ENST00000447387 883 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 Z82190.1-201ENST00000454534 490 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 RN7SL863P-201ENST00000462370 296 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 RN7SL283P-201ENST00000489055 303 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 KLRA1P-201ENST00000503499 986 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 FAM60DP-201ENST00000524174 632 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 OR10V3P-201ENST00000525712 725 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 LARP7P2-201ENST00000575306 125 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC012443.1-201ENST00000605605 231 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC100793.4-201ENST00000613683 429 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AL356585.4-201ENST00000623078 1229 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AP003122.6-201ENST00000623831 495 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.16□□□□□ -1.9
LRRC40Q9H9A6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms