Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 RFC5P1-201ENST00000454419 874 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 ST13P14-201ENST00000474095 734 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC109925.1-201ENST00000478069 331 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC104027.1-201ENST00000521887 300 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AP005205.1-201ENST00000563503 508 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AL606834.2-201ENST00000602954 668 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 SRGNP1-201ENST00000603392 451 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC024220.1-201ENST00000603675 484 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 uc_338.25-201ENST00000613756 156 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC006927.2-201ENST00000639256 389 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 MFSD8-245ENST00000641743 948 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 MTND5P27-201ENST00000428871 1720 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 CUL1P1-201ENST00000509510 2425 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 RNU5D-1-201ENST00000363299 116 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 RNU5B-4P-201ENST00000363508 111 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 RNU6-1300P-201ENST00000391046 108 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 SAR1AP2-201ENST00000392696 594 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 RNU4-47P-201ENST00000410876 114 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 RPS15AP38-201ENST00000413110 372 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 MRPL50P2-201ENST00000416821 482 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 MTCO1P39-201ENST00000426148 480 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC091862.1-201ENST00000438016 1100 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 VN1R10P-201ENST00000447106 875 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 COX6CP18-201ENST00000448769 222 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC092757.1-201ENST00000467293 467 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 RN7SL807P-201ENST00000470923 297 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 CBX3P3-201ENST00000508108 532 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 SNORA31.1-201ENST00000515993 133 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 SNORA31.5-201ENST00000516190 133 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 RNA5SP380-201ENST00000517190 98 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC027309.2-201ENST00000520566 192 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AP001189.2-201ENST00000527320 189 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC087894.1-201ENST00000538359 518 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 MED28P6-201ENST00000558776 231 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC037471.2-201ENST00000564941 598 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 MIR5680-201ENST00000577577 84 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 RPL23AP92-201ENST00000603609 255 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AL035411.2-201ENST00000604022 421 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC009570.1-201ENST00000609599 745 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 MIR6076-201ENST00000617521 113 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC087821.2-201ENST00000637086 450 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 AC093908.1-201ENST00000623125 8092 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 MTND5P1-201ENST00000445440 1375 ntBASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
POLR1EQ9GZS1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AL136520.1-201ENST00000600311 1322 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 OR1S2-201ENST00000302592 978 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 RNA5SP383-201ENST00000362934 120 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 ARF4P3-201ENST00000397387 509 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 BTF3P8-201ENST00000414577 526 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 SSXP9-201ENST00000417503 292 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC027644.1-201ENST00000419595 298 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 RPL7P46-201ENST00000425129 740 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 DPRXP1-201ENST00000426312 460 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AL451062.2-201ENST00000427515 271 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 BX890604.2-201ENST00000427883 474 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC004866.2-201ENST00000438285 481 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms