Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 OR51AB1P-201ENST00000429046 620 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 USP12PX-201ENST00000432383 1057 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC119618.1-201ENST00000434191 222 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 HMGB3P12-201ENST00000438745 556 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC114495.1-201ENST00000441274 436 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 snoU13.1-201ENST00000459157 104 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 IGLV2-34-201ENST00000490007 283 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC079382.1-201ENST00000493346 557 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 RPL36AP41-201ENST00000493820 306 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC098799.2-201ENST00000509466 868 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 RN7SKP82-201ENST00000516786 223 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 SNORA20.3-201ENST00000516880 132 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC022790.1-201ENST00000522872 204 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 BNIP3P5-201ENST00000562290 498 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC068790.5-201ENST00000602741 355 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 YWHAQP7-201ENST00000603536 658 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AL020991.1-201ENST00000612314 373 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 MIR6780A-201ENST00000615089 68 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC063943.3-201ENST00000615562 356 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC012150.2-201ENST00000621300 544 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AC114546.3-201ENST00000623582 1734 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 MAPK10-253ENST00000641010 4072 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 MAPK10-304ENST00000641341 3984 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC079741.1-201ENST00000321498 212 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 RNA5SP191-201ENST00000362585 102 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 RNU6-797P-201ENST00000363101 109 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 Y_RNA.159-201ENST00000363674 87 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 RNU6-359P-201ENST00000365466 108 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 SNORA20.2-201ENST00000383922 131 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 U3.20-201ENST00000390909 217 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 MIR298-201ENST00000401212 88 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 RN7SKP235-201ENST00000410662 305 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 EIF4A1P3-201ENST00000411521 244 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC140479.3-201ENST00000418944 1126 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AL359265.2-201ENST00000434367 631 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC069285.2-201ENST00000440210 275 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC079804.1-201ENST00000461922 436 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 RPS4XP10-201ENST00000465034 731 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC103987.1-201ENST00000473394 348 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC021382.1-201ENST00000483523 359 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC055855.1-201ENST00000489563 579 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 HMGB1P21-201ENST00000502313 581 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC114781.4-201ENST00000513707 639 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 SUB1P2-201ENST00000556401 297 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC005730.3-201ENST00000583067 366 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC068790.3-201ENST00000602988 553 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AL009028.1-201ENST00000604895 802 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AP001330.5-201ENST00000607176 411 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AL138721.1-201ENST00000616756 179 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AL359314.1-201ENST00000616913 261 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC104985.2-201ENST00000620598 500 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AP005264.7-201ENST00000625003 745 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 AC027290.2-201ENST00000623210 18662 ntBASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.22□□□□□ -1.73
AMBRA1Q9C0C7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
AMBRA1Q9C0C7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms