Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 SUMO2P6-201ENST00000505273 288 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-479P-201ENST00000516348 105 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 MRPS18CP4-201ENST00000535821 231 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 MT1CP-201ENST00000567054 174 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC104581.2-201ENST00000572227 430 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC008814.1-201ENST00000603797 406 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-6P-201ENST00000606623 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AL589743.6-201ENST00000611025 117 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC120057.5-201ENST00000623840 154 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC061999.1-201ENST00000624454 177 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USB1Q9BQ65 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
USB1Q9BQ65 AOX3P-204ENST00000491025 2107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USB1Q9BQ65 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
USB1Q9BQ65 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.84□□□□□ -1.48
USB1Q9BQ65 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
USB1Q9BQ65 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
USB1Q9BQ65 AC097461.1-201ENST00000568928 2821 ntBASIC5.84□□□□□ -1.48
USB1Q9BQ65 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.84□□□□□ -1.48
USB1Q9BQ65 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
USB1Q9BQ65 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 BX322639.1-202ENST00000423987 2213 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 RNU6-1155P-201ENST00000363554 107 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 RNU6-827P-201ENST00000365553 106 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 RNU11-201ENST00000387069 134 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 SNORD78.2-201ENST00000391076 69 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 RNA5SP56-201ENST00000410277 118 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 RNU2-43P-201ENST00000410306 190 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 RNU2-18P-201ENST00000411224 162 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC140479.3-201ENST00000418944 1126 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC083855.1-201ENST00000440041 258 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 RNU6-1095P-201ENST00000516148 108 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 RNU6-1012P-201ENST00000516606 109 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 Y_RNA.706-201ENST00000516933 99 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC025755.1-201ENST00000521306 278 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 TRAV37-201ENST00000553906 342 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC004232.1-201ENST00000571388 208 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC138207.8-204ENST00000579588 527 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 MIR4659A-201ENST00000580269 81 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AL360012.1-201ENST00000602813 131 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 Z99571.1-201ENST00000636677 394 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC009229.4-201ENST00000623854 1947 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AC105114.1-201ENST00000624795 1862 ntBASIC5.83□□□□□ -1.48
USB1Q9BQ65 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USB1Q9BQ65 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.83□□□□□ -1.48
USB1Q9BQ65 FANCD2P2-201ENST00000437591 1400 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
USB1Q9BQ65 THAP12P5-201ENST00000405864 2275 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
USB1Q9BQ65 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USB1Q9BQ65 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms