Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 ARF4P1-201ENST00000605447 541 ntBASIC4.32□□□□□ -1.72
SCAMP4Q969E2 AL008729.2-201ENST00000606393 473 ntBASIC4.32□□□□□ -1.72
SCAMP4Q969E2 AC004067.1-201ENST00000608733 700 ntBASIC4.32□□□□□ -1.72
SCAMP4Q969E2 AC017083.3-201ENST00000609955 700 ntBASIC4.32□□□□□ -1.72
SCAMP4Q969E2 AC002553.4-201ENST00000616896 331 ntBASIC4.32□□□□□ -1.72
SCAMP4Q969E2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 AC019226.1-201ENST00000625666 515 ntBASIC4.32□□□□□ -1.72
SCAMP4Q969E2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 MIR6830-201ENST00000636015 70 ntBASIC4.32□□□□□ -1.72
SCAMP4Q969E2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.32□□□□□ -1.72
SCAMP4Q969E2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 AC006971.1-201ENST00000407916 4486 ntBASIC4.32□□□□□ -1.72
SCAMP4Q969E2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.32□□□□□ -1.72
SCAMP4Q969E2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 Y_RNA.159-201ENST00000363674 87 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 RNA5SP175-201ENST00000364275 119 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 Y_RNA.295-201ENST00000364918 102 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC068538.1-201ENST00000376856 336 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 RNU6-483P-201ENST00000384088 108 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 CCDC58P2-201ENST00000417131 366 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 HMGB3P20-201ENST00000417997 600 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AL109913.1-201ENST00000421173 514 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 FTH1P1-201ENST00000437933 532 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 TPT1P12-201ENST00000448968 492 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 SNORD121B-201ENST00000458838 81 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC041039.1-201ENST00000485656 536 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 RNA5SP337-201ENST00000517007 109 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 RNU6-1220P-201ENST00000517126 108 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC022616.3-201ENST00000523940 148 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 MTND1P35-201ENST00000526739 508 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AL352979.3-201ENST00000553515 247 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AL121579.1-201ENST00000555129 305 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 MIR3939-201ENST00000582614 106 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AL355812.1-201ENST00000603215 216 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 SNORD91B-202ENST00000608459 222 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC007546.1-201ENST00000619452 559 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 MIR1321-201ENST00000637766 79 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 OR52H1-202ENST00000641796 1061 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AC092435.4-201ENST00000623012 4159 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 ZNF33CP-201ENST00000432492 2030 ntBASIC4.31□□□□□ -1.72
SCAMP4Q969E2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAMP4Q969E2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCAMP4Q969E2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCAMP4Q969E2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
SCAMP4Q969E2 DDX18P3-201ENST00000404856 2007 ntBASIC4.3□□□□□ -1.72
SCAMP4Q969E2 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.3□□□□□ -1.72
SCAMP4Q969E2 Y_RNA.89-201ENST00000363031 102 ntBASIC4.3□□□□□ -1.72
SCAMP4Q969E2 RNU6-263P-201ENST00000363811 107 ntBASIC4.3□□□□□ -1.72
SCAMP4Q969E2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.3□□□□□ -1.72
SCAMP4Q969E2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.3□□□□□ -1.72
SCAMP4Q969E2 SNORA70E-201ENST00000384492 135 ntBASIC4.3□□□□□ -1.72
SCAMP4Q969E2 MIR1911-201ENST00000410783 80 ntBASIC4.3□□□□□ -1.72
SCAMP4Q969E2 AL353193.1-201ENST00000421444 268 ntBASIC4.3□□□□□ -1.72
SCAMP4Q969E2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.3□□□□□ -1.72
SCAMP4Q969E2 AC005517.2-201ENST00000424673 553 ntBASIC4.3□□□□□ -1.72
SCAMP4Q969E2 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.3□□□□□ -1.72
SCAMP4Q969E2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.3□□□□□ -1.72
SCAMP4Q969E2 RAC1P7-201ENST00000445367 377 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms