Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC074029.4-201ENST00000624796 1859 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 CASC19-284ENST00000642142 1868 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AL161781.1-201ENST00000354277 403 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 RNU6-306P-201ENST00000384617 107 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 RNU6-959P-201ENST00000384671 107 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AL356421.1-201ENST00000403255 413 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AL359643.1-201ENST00000404109 423 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 RNU6-121P-201ENST00000410525 99 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 RPL36AP36-201ENST00000418616 301 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 MRPS18BP2-201ENST00000434310 759 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 RPL21P112-201ENST00000434403 463 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 GSTM5P1-201ENST00000434751 660 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 RN7SL41P-201ENST00000476144 297 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 RN7SKP288-201ENST00000516227 268 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 SNORA72.7-201ENST00000516349 94 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC007991.1-201ENST00000522680 631 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC103710.2-201ENST00000609912 942 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AL161637.1-201ENST00000622380 412 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 PWAR1-201ENST00000624188 2414 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AL391684.1-202ENST00000641293 1636 ntBASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO4Q2I0M5 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AC134882.1-201ENST00000603738 1676 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 IGKV7-3-201ENST00000357453 298 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 Y_RNA.8-201ENST00000362353 102 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 SNORD62.1-201ENST00000362541 86 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 RNU6-179P-201ENST00000363350 107 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 RNU6-1059P-201ENST00000363752 98 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 Y_RNA.199-201ENST00000364014 102 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 U3.11-201ENST00000364476 212 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 MIR130A-201ENST00000385274 89 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 RN7SKP151-201ENST00000410230 316 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AC004975.1-201ENST00000428733 208 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AC091286.1-201ENST00000431233 461 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 CR769767.1-201ENST00000436337 346 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 NOTCH2P1-201ENST00000443481 624 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 TDGF1P1-201ENST00000445734 527 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AC098869.1-201ENST00000481627 292 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 RPL21P129-201ENST00000491732 478 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AF279873.1-201ENST00000523393 313 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AC009643.1-201ENST00000532030 391 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AC024405.2-202ENST00000532731 184 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AC090751.1-201ENST00000566966 267 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 MIR4311-201ENST00000580794 100 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 MIR5692C1-201ENST00000585309 91 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AL355877.2-201ENST00000603670 358 ntBASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO4Q2I0M5 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RSPO4Q2I0M5 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms