Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 AC008127.2-201ENST00000549925 1075 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.72□□□□□ -1.81
SMC1AQ14683 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SMC1AQ14683 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.72□□□□□ -1.81
SMC1AQ14683 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.72□□□□□ -1.81
SMC1AQ14683 AP001542.2-201ENST00000593141 364 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AC010738.1-201ENST00000604970 987 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AL136370.1-201ENST00000608166 691 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.72□□□□□ -1.81
SMC1AQ14683 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMC1AQ14683 AC091925.2-201ENST00000625059 256 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
SMC1AQ14683 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.71□□□□□ -1.82
SMC1AQ14683 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1AQ14683 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1AQ14683 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SMC1AQ14683 FRG1CP-201ENST00000358464 769 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1AQ14683 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SMC1AQ14683 SNORA48.5-201ENST00000391143 135 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 SAR1AP2-201ENST00000392696 594 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AL355143.1-201ENST00000407101 841 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 RN7SKP111-201ENST00000410349 271 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.71□□□□□ -1.82
SMC1AQ14683 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC1AQ14683 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.71□□□□□ -1.82
SMC1AQ14683 TRIAP1P1-201ENST00000427062 225 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.71□□□□□ -1.82
SMC1AQ14683 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC1AQ14683 AC091862.1-201ENST00000438016 1100 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC1AQ14683 AL357552.1-201ENST00000445254 415 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 SEPT14P24-201ENST00000447236 180 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.71□□□□□ -1.82
SMC1AQ14683 MTCO1P48-201ENST00000448024 1096 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.71□□□□□ -1.82
SMC1AQ14683 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1AQ14683 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.71□□□□□ -1.82
SMC1AQ14683 IGKV2-26-201ENST00000518305 343 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC1AQ14683 AC087894.1-201ENST00000538359 518 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.71□□□□□ -1.82
SMC1AQ14683 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.71□□□□□ -1.82
SMC1AQ14683 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.71□□□□□ -1.82
SMC1AQ14683 AL606834.2-201ENST00000602954 668 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AC009220.3-201ENST00000604318 586 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AC073387.2-201ENST00000604797 784 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AC106900.2-201ENST00000604994 317 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AL451074.6-201ENST00000608512 729 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1AQ14683 AL138955.1-201ENST00000622881 1040 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.71□□□□□ -1.82
SMC1AQ14683 AC110774.1-201ENST00000623567 2018 ntBASIC3.71□□□□□ -1.82
SMC1AQ14683 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1AQ14683 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1AQ14683 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1AQ14683 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMC1AQ14683 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.7□□□□□ -1.82
SMC1AQ14683 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMC1AQ14683 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
SMC1AQ14683 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMC1AQ14683 RNU5B-1-201ENST00000363286 116 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 RNU5B-4P-201ENST00000363508 111 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 AC012498.1-201ENST00000424037 437 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.7□□□□□ -1.82
SMC1AQ14683 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.7□□□□□ -1.82
SMC1AQ14683 RPL7P44-201ENST00000424827 742 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC1AQ14683 RPL7P23-201ENST00000493874 747 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC1AQ14683 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.7□□□□□ -1.82
SMC1AQ14683 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC1AQ14683 FCF1P8-201ENST00000510322 597 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.7□□□□□ -1.82
SMC1AQ14683 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SMC1AQ14683 DUXAP6-201ENST00000553858 601 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC1AQ14683 MIR5680-201ENST00000577577 84 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 AC126365.2-201ENST00000580630 379 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 AC006116.7-201ENST00000590141 756 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 AP003476.1-201ENST00000623984 516 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 AC006927.2-201ENST00000639256 389 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.7□□□□□ -1.82
SMC1AQ14683 AC139713.2-210ENST00000641741 992 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SMC1AQ14683 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.7□□□□□ -1.82
SMC1AQ14683 MFSD8-233ENST00000641482 4860 ntBASIC3.7□□□□□ -1.82
SMC1AQ14683 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.7□□□□□ -1.82
SMC1AQ14683 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.7□□□□□ -1.82
SMC1AQ14683 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.7□□□□□ -1.82
SMC1AQ14683 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMC1AQ14683 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMC1AQ14683 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.69□□□□□ -1.82
SMC1AQ14683 AL645937.1-201ENST00000641739 1652 ntBASIC3.69□□□□□ -1.82
SMC1AQ14683 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMC1AQ14683 RNU6-1176P-201ENST00000390955 107 ntBASIC3.69□□□□□ -1.82
SMC1AQ14683 AC016769.3-201ENST00000396562 315 ntBASIC3.69□□□□□ -1.82
SMC1AQ14683 U3.42-201ENST00000408746 214 ntBASIC3.69□□□□□ -1.82
SMC1AQ14683 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms