Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MRE11P49959 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
MRE11P49959 AL356489.2-201ENST00000566968 3528 ntBASIC5.06□□□□□ -1.6
MRE11P49959 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MRE11P49959 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MRE11P49959 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MRE11P49959 Y_RNA.61-201ENST00000362835 102 ntBASIC5.06□□□□□ -1.6
MRE11P49959 RNU6-657P-201ENST00000383904 107 ntBASIC5.06□□□□□ -1.6
MRE11P49959 Y_RNA.402-201ENST00000383972 102 ntBASIC5.06□□□□□ -1.6
MRE11P49959 RNU6-533P-201ENST00000384144 107 ntBASIC5.06□□□□□ -1.6
MRE11P49959 RNU6-780P-201ENST00000391030 104 ntBASIC5.06□□□□□ -1.6
MRE11P49959 MTCO1P17-201ENST00000411522 491 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AL513174.1-201ENST00000423182 629 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AC233981.1-201ENST00000423224 461 ntBASIC5.06□□□□□ -1.6
MRE11P49959 RPL7AP25-201ENST00000423357 805 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AC012498.1-201ENST00000424037 437 ntBASIC5.06□□□□□ -1.6
MRE11P49959 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MRE11P49959 TIMM9P3-201ENST00000428659 274 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AC073464.1-201ENST00000429823 534 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AL451074.3-201ENST00000437709 472 ntBASIC5.06□□□□□ -1.6
MRE11P49959 RPL23AP89-201ENST00000439324 255 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.06□□□□□ -1.6
MRE11P49959 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.06□□□□□ -1.6
MRE11P49959 AC005229.2-201ENST00000456995 399 ntBASIC5.06□□□□□ -1.6
MRE11P49959 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.06□□□□□ -1.6
MRE11P49959 RPL7P19-201ENST00000469948 618 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.06□□□□□ -1.6
MRE11P49959 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.06□□□□□ -1.6
MRE11P49959 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.06□□□□□ -1.6
MRE11P49959 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.06□□□□□ -1.6
MRE11P49959 AC009646.1-201ENST00000510455 318 ntBASIC5.06□□□□□ -1.6
MRE11P49959 SNORA74D-201ENST00000516404 141 ntBASIC5.06□□□□□ -1.6
MRE11P49959 RNU6-347P-201ENST00000516658 105 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.06□□□□□ -1.6
MRE11P49959 AP001893.2-201ENST00000526949 202 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.06□□□□□ -1.6
MRE11P49959 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.06□□□□□ -1.6
MRE11P49959 AK6P1-201ENST00000540219 478 ntBASIC5.06□□□□□ -1.6
MRE11P49959 OR8R1P-201ENST00000543943 764 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AC090502.2-201ENST00000549267 280 ntBASIC5.06□□□□□ -1.6
MRE11P49959 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.06□□□□□ -1.6
MRE11P49959 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.06□□□□□ -1.6
MRE11P49959 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.06□□□□□ -1.6
MRE11P49959 AL133338.2-201ENST00000604292 736 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AL158211.4-201ENST00000606988 584 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.06□□□□□ -1.6
MRE11P49959 AC069200.1-201ENST00000609511 323 ntBASIC5.06□□□□□ -1.6
MRE11P49959 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MRE11P49959 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MRE11P49959 AC068880.5-201ENST00000624331 290 ntBASIC5.06□□□□□ -1.6
MRE11P49959 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
MRE11P49959 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
MRE11P49959 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MRE11P49959 Z73965.1-201ENST00000623412 2297 ntBASIC5.06□□□□□ -1.6
MRE11P49959 AC099654.2-201ENST00000433031 1980 ntBASIC5.05□□□□□ -1.6
MRE11P49959 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.05□□□□□ -1.6
MRE11P49959 AC006378.2-201ENST00000623178 2476 ntBASIC5.05□□□□□ -1.6
MRE11P49959 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.05□□□□□ -1.6
MRE11P49959 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
MRE11P49959 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MRE11P49959 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MRE11P49959 OR4A15-201ENST00000314706 1035 ntBASIC5.05□□□□□ -1.6
MRE11P49959 Y_RNA.38-201ENST00000362617 102 ntBASIC5.05□□□□□ -1.6
MRE11P49959 SNORD113.2-201ENST00000364166 89 ntBASIC5.05□□□□□ -1.6
MRE11P49959 RNU6-809P-201ENST00000384461 107 ntBASIC5.05□□□□□ -1.6
MRE11P49959 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MRE11P49959 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.05□□□□□ -1.6
MRE11P49959 RNU2-28P-201ENST00000410457 189 ntBASIC5.05□□□□□ -1.6
MRE11P49959 MIR1911-201ENST00000410783 80 ntBASIC5.05□□□□□ -1.6
MRE11P49959 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.05□□□□□ -1.6
MRE11P49959 OR51A5P-201ENST00000415429 942 ntBASIC5.05□□□□□ -1.6
MRE11P49959 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.05□□□□□ -1.6
MRE11P49959 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.05□□□□□ -1.6
MRE11P49959 ELOCP14-201ENST00000428070 331 ntBASIC5.05□□□□□ -1.6
MRE11P49959 RPEP2-201ENST00000432149 701 ntBASIC5.05□□□□□ -1.6
MRE11P49959 NRBF2P3-201ENST00000432731 865 ntBASIC5.05□□□□□ -1.6
MRE11P49959 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.05□□□□□ -1.6
MRE11P49959 OR4C10P-201ENST00000434991 931 ntBASIC5.05□□□□□ -1.6
MRE11P49959 ELOCP7-201ENST00000439968 331 ntBASIC5.05□□□□□ -1.6
MRE11P49959 RABEPKP1-201ENST00000440529 1026 ntBASIC5.05□□□□□ -1.6
MRE11P49959 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.05□□□□□ -1.6
MRE11P49959 MTND6P13-201ENST00000443510 523 ntBASIC5.05□□□□□ -1.6
MRE11P49959 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.05□□□□□ -1.6
MRE11P49959 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.05□□□□□ -1.6
MRE11P49959 MTCO1P27-201ENST00000448269 226 ntBASIC5.05□□□□□ -1.6
MRE11P49959 NUTF2P3-201ENST00000448540 384 ntBASIC5.05□□□□□ -1.6
MRE11P49959 GAPDHP17-201ENST00000449858 1001 ntBASIC5.05□□□□□ -1.6
MRE11P49959 AC012170.1-201ENST00000495139 359 ntBASIC5.05□□□□□ -1.6
MRE11P49959 AC008628.2-201ENST00000502605 298 ntBASIC5.05□□□□□ -1.6
MRE11P49959 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
MRE11P49959 ARL4AP2-201ENST00000507378 601 ntBASIC5.05□□□□□ -1.6
MRE11P49959 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
MRE11P49959 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.05□□□□□ -1.6
MRE11P49959 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
MRE11P49959 OR5AP1P-201ENST00000529730 940 ntBASIC5.05□□□□□ -1.6
MRE11P49959 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.05□□□□□ -1.6
MRE11P49959 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.05□□□□□ -1.6
MRE11P49959 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.05□□□□□ -1.6
MRE11P49959 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.05□□□□□ -1.6
MRE11P49959 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms