Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PTPN9P43378 AC092447.10-201ENST00000620607 1652 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PTPN9P43378 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN9P43378 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PTPN9P43378 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PTPN9P43378 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 FGF7P2-201ENST00000332473 296 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 RNU6-28P-201ENST00000362378 107 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 RNU5F-6P-201ENST00000362979 116 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 SNORD116-4-201ENST00000384733 96 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 AL138878.1-201ENST00000405131 347 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 RNA5SP56-201ENST00000410277 118 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN9P43378 AC007742.1-201ENST00000425789 329 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AC006548.1-201ENST00000427470 102 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 ELOCP26-201ENST00000436067 329 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN9P43378 AL353706.1-201ENST00000436728 494 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 LSM1P1-201ENST00000438629 273 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 THAP5P1-201ENST00000439089 262 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 SDCBPP1-201ENST00000440192 890 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN9P43378 CDC27P1-201ENST00000445384 715 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN9P43378 snoU109.4-201ENST00000458953 143 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 OR9M1P-201ENST00000459641 921 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AC103987.1-201ENST00000473394 348 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AC084198.1-201ENST00000477747 402 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AC010460.1-201ENST00000507087 466 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 MTND3P5-201ENST00000512798 333 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 MTCO2P32-201ENST00000514865 403 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AC116347.2-201ENST00000514912 523 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 RN7SKP116-201ENST00000516902 319 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 RNU4-60P-201ENST00000517239 135 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN9P43378 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN9P43378 AP003385.6-201ENST00000531603 374 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.02□□□□□ -1.77
PTPN9P43378 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN9P43378 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPN9P43378 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN9P43378 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPN9P43378 AC012414.6-201ENST00000568241 401 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AC090615.1-201ENST00000577519 154 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 MIR544B-201ENST00000582372 78 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.02□□□□□ -1.77
PTPN9P43378 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPN9P43378 RSL24D1P11-201ENST00000591045 491 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 BNIP3P23-201ENST00000599655 511 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AC012065.4-201ENST00000602445 679 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 PRELID3BP8-201ENST00000604148 295 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 AC128687.1-201ENST00000605304 619 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AC087752.4-201ENST00000605911 462 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 AL391497.1-201ENST00000608671 547 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PTPN9P43378 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 AL731566.2-201ENST00000618971 317 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 CR381572.1-201ENST00000625098 102 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPN9P43378 AC090582.1-201ENST00000636321 199 ntBASIC4.02□□□□□ -1.77
PTPN9P43378 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN9P43378 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN9P43378 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PTPN9P43378 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN9P43378 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PTPN9P43378 Y_RNA.194-201ENST00000363985 102 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 RNU6-289P-201ENST00000364093 107 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 U1.1-201ENST00000384101 164 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 RNU6-761P-201ENST00000384148 107 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 RNU6-769P-201ENST00000384407 104 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 MT-TC-201ENST00000387405 66 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 RN7SKP142-201ENST00000411236 328 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 MTCO1P17-201ENST00000411522 491 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN9P43378 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN9P43378 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN9P43378 COX6CP12-201ENST00000446748 202 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 ST13P20-201ENST00000447996 1065 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN9P43378 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN9P43378 HMGB1P15-201ENST00000453854 435 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 AL445669.2-201ENST00000454425 421 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 SNRPGP9-201ENST00000456025 225 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN9P43378 AP000797.1-201ENST00000478870 387 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms