Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.59□□□□□ -1.67
COL15A1P39059 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
COL15A1P39059 KPNA2P2-201ENST00000419546 1489 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL15A1P39059 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.59□□□□□ -1.67
COL15A1P39059 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.59□□□□□ -1.67
COL15A1P39059 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL15A1P39059 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL15A1P39059 MIR649-201ENST00000384843 97 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.59□□□□□ -1.67
COL15A1P39059 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.59□□□□□ -1.67
COL15A1P39059 AL953862.1-201ENST00000423016 168 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL15A1P39059 DLGAP5P1-201ENST00000430307 464 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.59□□□□□ -1.67
COL15A1P39059 UBE2FP3-201ENST00000436366 524 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 AL831737.1-201ENST00000441288 271 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 AC109486.1-201ENST00000486833 374 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 AC069499.1-201ENST00000489433 509 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
COL15A1P39059 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.59□□□□□ -1.67
COL15A1P39059 RNA5SP216-201ENST00000516111 123 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.59□□□□□ -1.67
COL15A1P39059 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.59□□□□□ -1.67
COL15A1P39059 AC022882.1-201ENST00000532142 501 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.59□□□□□ -1.67
COL15A1P39059 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.59□□□□□ -1.67
COL15A1P39059 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.59□□□□□ -1.67
COL15A1P39059 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.59□□□□□ -1.67
COL15A1P39059 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.59□□□□□ -1.67
COL15A1P39059 CYCSP2-201ENST00000558168 301 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.59□□□□□ -1.67
COL15A1P39059 AC012213.3-201ENST00000577199 777 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.59□□□□□ -1.67
COL15A1P39059 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.59□□□□□ -1.67
COL15A1P39059 AC103591.3-201ENST00000608684 209 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 AC012360.2-201ENST00000609349 391 ntBASIC4.59□□□□□ -1.67
COL15A1P39059 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.59□□□□□ -1.67
COL15A1P39059 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.59□□□□□ -1.67
COL15A1P39059 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL15A1P39059 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.59□□□□□ -1.68
COL15A1P39059 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.58□□□□□ -1.68
COL15A1P39059 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.58□□□□□ -1.68
COL15A1P39059 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 CR383658.2-201ENST00000547576 1525 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.58□□□□□ -1.68
COL15A1P39059 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL15A1P39059 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL15A1P39059 MIR128-1-201ENST00000384921 82 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 ZNF603P-201ENST00000405613 487 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 MTHFD2P2-201ENST00000407725 247 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AL023807.1-201ENST00000407932 359 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 RN7SKP142-201ENST00000411236 328 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL15A1P39059 AC083875.1-201ENST00000419509 405 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.58□□□□□ -1.68
COL15A1P39059 RPL23AP16-201ENST00000441715 421 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 RPL39P6-201ENST00000448289 150 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AC010655.1-201ENST00000449336 292 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.58□□□□□ -1.68
COL15A1P39059 RNU6-956P-201ENST00000458868 103 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 RN7SL807P-201ENST00000470923 297 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.58□□□□□ -1.68
COL15A1P39059 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.58□□□□□ -1.68
COL15A1P39059 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.58□□□□□ -1.68
COL15A1P39059 AC018797.3-201ENST00000513388 1241 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.58□□□□□ -1.68
COL15A1P39059 AP000873.5-201ENST00000533906 236 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AC008127.2-201ENST00000549925 1075 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.58□□□□□ -1.68
COL15A1P39059 AC006362.1-201ENST00000567392 174 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.58□□□□□ -1.68
COL15A1P39059 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.58□□□□□ -1.68
COL15A1P39059 AC008507.1-201ENST00000587506 734 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.58□□□□□ -1.68
COL15A1P39059 MIR7851-201ENST00000610611 160 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 MIR8057-201ENST00000620957 69 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AC000123.2-201ENST00000623124 461 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AP006248.2-201ENST00000623309 592 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 AC091905.1-201ENST00000624400 311 ntBASIC4.58□□□□□ -1.68
COL15A1P39059 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.58□□□□□ -1.68
COL15A1P39059 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.58□□□□□ -1.68
COL15A1P39059 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL15A1P39059 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL15A1P39059 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL15A1P39059 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL15A1P39059 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL15A1P39059 OR52B1P-201ENST00000316506 909 ntBASIC4.57□□□□□ -1.68
COL15A1P39059 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL15A1P39059 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.57□□□□□ -1.68
COL15A1P39059 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL15A1P39059 RNU6-723P-201ENST00000383973 107 ntBASIC4.57□□□□□ -1.68
COL15A1P39059 RNU6-1293P-201ENST00000384077 107 ntBASIC4.57□□□□□ -1.68
COL15A1P39059 Y_RNA.553-201ENST00000384670 102 ntBASIC4.57□□□□□ -1.68
COL15A1P39059 Y_RNA.559-201ENST00000384686 107 ntBASIC4.57□□□□□ -1.68
COL15A1P39059 SNORA48.2-201ENST00000390926 124 ntBASIC4.57□□□□□ -1.68
COL15A1P39059 RPS24P12-201ENST00000402084 394 ntBASIC4.57□□□□□ -1.68
COL15A1P39059 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL15A1P39059 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.57□□□□□ -1.68
COL15A1P39059 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms