Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 SETP8-201ENST00000435341 628 ntBASIC2.72□□□□□ -1.97
USF1P22415 RPS23P3-201ENST00000470993 430 ntBASIC2.72□□□□□ -1.97
USF1P22415 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.72□□□□□ -1.97
USF1P22415 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.72□□□□□ -1.97
USF1P22415 AC084024.2-201ENST00000503480 791 ntBASIC2.72□□□□□ -1.97
USF1P22415 AC091860.1-201ENST00000505723 432 ntBASIC2.72□□□□□ -1.97
USF1P22415 AC069306.1-201ENST00000507006 843 ntBASIC2.72□□□□□ -1.97
USF1P22415 AC008628.1-201ENST00000508663 265 ntBASIC2.72□□□□□ -1.97
USF1P22415 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.72□□□□□ -1.97
USF1P22415 RNU6-885P-201ENST00000516607 104 ntBASIC2.72□□□□□ -1.97
USF1P22415 MIR2276-201ENST00000516886 89 ntBASIC2.72□□□□□ -1.97
USF1P22415 RNU6-334P-201ENST00000517072 102 ntBASIC2.72□□□□□ -1.97
USF1P22415 SNORA31.26-201ENST00000517250 137 ntBASIC2.72□□□□□ -1.97
USF1P22415 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
USF1P22415 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.72□□□□□ -1.97
USF1P22415 AC068657.1-201ENST00000520807 306 ntBASIC2.72□□□□□ -1.97
USF1P22415 AC024224.1-201ENST00000538284 609 ntBASIC2.72□□□□□ -1.97
USF1P22415 AC018630.1-201ENST00000541376 925 ntBASIC2.72□□□□□ -1.97
USF1P22415 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.72□□□□□ -1.97
USF1P22415 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.72□□□□□ -1.97
USF1P22415 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.72□□□□□ -1.97
USF1P22415 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.72□□□□□ -1.97
USF1P22415 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.72□□□□□ -1.97
USF1P22415 AC006539.2-201ENST00000601729 572 ntBASIC2.72□□□□□ -1.97
USF1P22415 AL162574.2-201ENST00000614618 657 ntBASIC2.72□□□□□ -1.97
USF1P22415 AC107308.1-201ENST00000615897 301 ntBASIC2.72□□□□□ -1.97
USF1P22415 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.72□□□□□ -1.97
USF1P22415 AC095031.1-201ENST00000623685 672 ntBASIC2.72□□□□□ -1.97
USF1P22415 AL356094.1-201ENST00000624663 1212 ntBASIC2.72□□□□□ -1.97
USF1P22415 AC073476.4-201ENST00000628409 72 ntBASIC2.72□□□□□ -1.97
USF1P22415 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.71□□□□□ -1.98
USF1P22415 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.71□□□□□ -1.98
USF1P22415 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
USF1P22415 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
USF1P22415 AC004972.1-201ENST00000623934 2209 ntBASIC2.71□□□□□ -1.98
USF1P22415 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
USF1P22415 SNORA51.6-201ENST00000384151 125 ntBASIC2.71□□□□□ -1.98
USF1P22415 U3.29-201ENST00000391296 212 ntBASIC2.71□□□□□ -1.98
USF1P22415 RPL22P22-201ENST00000395439 379 ntBASIC2.71□□□□□ -1.98
USF1P22415 RPL5P18-201ENST00000406671 891 ntBASIC2.71□□□□□ -1.98
USF1P22415 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.71□□□□□ -1.98
USF1P22415 RNU6-575P-201ENST00000411326 105 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC109780.2-201ENST00000413467 845 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.71□□□□□ -1.98
USF1P22415 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.71□□□□□ -1.98
USF1P22415 MTCO2P1-201ENST00000424648 477 ntBASIC2.71□□□□□ -1.98
USF1P22415 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
USF1P22415 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.71□□□□□ -1.98
USF1P22415 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.71□□□□□ -1.98
USF1P22415 AC000041.1-201ENST00000439655 175 ntBASIC2.71□□□□□ -1.98
USF1P22415 ATP5C1P1-201ENST00000441945 895 ntBASIC2.71□□□□□ -1.98
USF1P22415 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.71□□□□□ -1.98
USF1P22415 AL096829.2-201ENST00000446582 742 ntBASIC2.71□□□□□ -1.98
USF1P22415 snoU109.4-201ENST00000458953 143 ntBASIC2.71□□□□□ -1.98
USF1P22415 HMGB1P25-201ENST00000468402 607 ntBASIC2.71□□□□□ -1.98
USF1P22415 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
USF1P22415 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.71□□□□□ -1.98
USF1P22415 KCTD9P5-201ENST00000504141 1170 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.71□□□□□ -1.98
USF1P22415 SNORA31.8-201ENST00000516327 108 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.71□□□□□ -1.98
USF1P22415 AC113192.3-201ENST00000529152 742 ntBASIC2.71□□□□□ -1.98
USF1P22415 OR4P1P-201ENST00000530808 1136 ntBASIC2.71□□□□□ -1.98
USF1P22415 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.71□□□□□ -1.98
USF1P22415 EEF1B2P4-201ENST00000551398 348 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC005476.1-201ENST00000554427 397 ntBASIC2.71□□□□□ -1.98
USF1P22415 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.71□□□□□ -1.98
USF1P22415 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.71□□□□□ -1.98
USF1P22415 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.71□□□□□ -1.98
USF1P22415 MIR4666A-201ENST00000580160 79 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC005776.1-201ENST00000603164 290 ntBASIC2.71□□□□□ -1.98
USF1P22415 RPAP2P1-201ENST00000603626 1168 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC055876.5-201ENST00000605667 259 ntBASIC2.71□□□□□ -1.98
USF1P22415 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
USF1P22415 AC068831.7-201ENST00000616954 363 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC138932.5-201ENST00000617759 563 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC078880.5-201ENST00000617845 421 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC073592.7-201ENST00000623659 507 ntBASIC2.71□□□□□ -1.98
USF1P22415 AC018692.3-201ENST00000623929 123 ntBASIC2.71□□□□□ -1.98
USF1P22415 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
USF1P22415 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
USF1P22415 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
USF1P22415 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
USF1P22415 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
USF1P22415 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
USF1P22415 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.7□□□□□ -1.98
USF1P22415 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.7□□□□□ -1.98
USF1P22415 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.7□□□□□ -1.98
USF1P22415 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
USF1P22415 RNU6-1074P-201ENST00000383995 104 ntBASIC2.7□□□□□ -1.98
USF1P22415 RNU6-468P-201ENST00000384003 109 ntBASIC2.7□□□□□ -1.98
USF1P22415 RNU6-207P-201ENST00000384137 107 ntBASIC2.7□□□□□ -1.98
USF1P22415 Y_RNA.510-201ENST00000384511 114 ntBASIC2.7□□□□□ -1.98
USF1P22415 CYCSP45-201ENST00000402289 315 ntBASIC2.7□□□□□ -1.98
USF1P22415 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.7□□□□□ -1.98
USF1P22415 AL031121.1-201ENST00000406553 254 ntBASIC2.7□□□□□ -1.98
USF1P22415 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USF1P22415 NDUFB4P5-201ENST00000415445 361 ntBASIC2.7□□□□□ -1.98
USF1P22415 RPL21P32-201ENST00000419877 477 ntBASIC2.7□□□□□ -1.98
USF1P22415 GTF2IP23-201ENST00000423746 351 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms