Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.1□□□□□ -1.91
RETP07949 COX6CP8-201ENST00000522620 226 ntBASIC3.1□□□□□ -1.91
RETP07949 EIF5A2P1-201ENST00000564027 460 ntBASIC3.1□□□□□ -1.91
RETP07949 AL136370.1-201ENST00000608166 691 ntBASIC3.1□□□□□ -1.91
RETP07949 AC016542.1-201ENST00000608259 493 ntBASIC3.1□□□□□ -1.91
RETP07949 AL133445.2-201ENST00000611191 527 ntBASIC3.1□□□□□ -1.91
RETP07949 AL138960.2-201ENST00000625145 535 ntBASIC3.1□□□□□ -1.91
RETP07949 AL356118.1-201ENST00000635272 1078 ntBASIC3.1□□□□□ -1.91
RETP07949 SEC63P2-201ENST00000503863 1939 ntBASIC3.1□□□□□ -1.91
RETP07949 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.1□□□□□ -1.91
RETP07949 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.1□□□□□ -1.91
RETP07949 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RETP07949 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RETP07949 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.09□□□□□ -1.91
RETP07949 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.09□□□□□ -1.91
RETP07949 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RETP07949 AC009487.2-201ENST00000420969 6821 ntBASIC3.09□□□□□ -1.91
RETP07949 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RETP07949 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
RETP07949 RNU6-50P-201ENST00000362356 103 ntBASIC3.09□□□□□ -1.91
RETP07949 RNU6-1339P-201ENST00000363574 91 ntBASIC3.09□□□□□ -1.91
RETP07949 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RETP07949 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.09□□□□□ -1.91
RETP07949 RNU6-1181P-201ENST00000384191 106 ntBASIC3.09□□□□□ -1.91
RETP07949 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RETP07949 RNA5SP229-201ENST00000410809 99 ntBASIC3.09□□□□□ -1.91
RETP07949 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.09□□□□□ -1.91
RETP07949 AC008173.1-201ENST00000418901 264 ntBASIC3.09□□□□□ -1.91
RETP07949 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.09□□□□□ -1.91
RETP07949 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.09□□□□□ -1.91
RETP07949 AC093151.1-201ENST00000427711 313 ntBASIC3.09□□□□□ -1.91
RETP07949 OR51AB1P-201ENST00000429046 620 ntBASIC3.09□□□□□ -1.91
RETP07949 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.09□□□□□ -1.91
RETP07949 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.09□□□□□ -1.91
RETP07949 YWHAZP7-201ENST00000436906 631 ntBASIC3.09□□□□□ -1.91
RETP07949 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.09□□□□□ -1.91
RETP07949 RPS24P13-201ENST00000442520 397 ntBASIC3.09□□□□□ -1.91
RETP07949 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.09□□□□□ -1.91
RETP07949 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.09□□□□□ -1.91
RETP07949 RPL21P18-201ENST00000469899 480 ntBASIC3.09□□□□□ -1.91
RETP07949 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.09□□□□□ -1.91
RETP07949 UBL5P3-201ENST00000475112 231 ntBASIC3.09□□□□□ -1.91
RETP07949 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
RETP07949 AC083906.5-201ENST00000503722 328 ntBASIC3.09□□□□□ -1.91
RETP07949 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
RETP07949 AC112206.4-201ENST00000515142 405 ntBASIC3.09□□□□□ -1.91
RETP07949 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.09□□□□□ -1.91
RETP07949 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RETP07949 AC091544.4-201ENST00000555268 342 ntBASIC3.09□□□□□ -1.91
RETP07949 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.09□□□□□ -1.91
RETP07949 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.09□□□□□ -1.91
RETP07949 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.09□□□□□ -1.91
RETP07949 AC120053.1-201ENST00000607706 736 ntBASIC3.09□□□□□ -1.91
RETP07949 AC021851.1-201ENST00000608537 1082 ntBASIC3.09□□□□□ -1.91
RETP07949 AL591516.1-201ENST00000611326 274 ntBASIC3.09□□□□□ -1.91
RETP07949 AC087241.4-201ENST00000612441 480 ntBASIC3.09□□□□□ -1.91
RETP07949 AC253576.2-201ENST00000618815 580 ntBASIC3.09□□□□□ -1.91
RETP07949 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.09□□□□□ -1.91
RETP07949 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
RETP07949 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.09□□□□□ -1.91
RETP07949 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RETP07949 AC008432.1-201ENST00000615912 1320 ntBASIC3.09□□□□□ -1.91
RETP07949 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
RETP07949 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.92
RETP07949 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.09□□□□□ -1.92
RETP07949 MTCO1P4-201ENST00000520516 1409 ntBASIC3.09□□□□□ -1.92
RETP07949 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RETP07949 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RETP07949 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RETP07949 AC062016.1-201ENST00000355719 319 ntBASIC3.08□□□□□ -1.92
RETP07949 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RETP07949 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RETP07949 RNU6-272P-201ENST00000411028 104 ntBASIC3.08□□□□□ -1.92
RETP07949 ATG3P1-201ENST00000419507 911 ntBASIC3.08□□□□□ -1.92
RETP07949 PAICSP7-201ENST00000419829 962 ntBASIC3.08□□□□□ -1.92
RETP07949 AL606495.1-201ENST00000422100 813 ntBASIC3.08□□□□□ -1.92
RETP07949 AC093422.3-201ENST00000428506 305 ntBASIC3.08□□□□□ -1.92
RETP07949 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.08□□□□□ -1.92
RETP07949 MOB1AP2-201ENST00000446060 614 ntBASIC3.08□□□□□ -1.92
RETP07949 GXYLT1P1-201ENST00000446657 490 ntBASIC3.08□□□□□ -1.92
RETP07949 AC016696.1-201ENST00000446949 318 ntBASIC3.08□□□□□ -1.92
RETP07949 AL513124.1-201ENST00000450410 614 ntBASIC3.08□□□□□ -1.92
RETP07949 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RETP07949 AC015908.1-201ENST00000478739 476 ntBASIC3.08□□□□□ -1.92
RETP07949 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RETP07949 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.08□□□□□ -1.92
RETP07949 AC016550.1-201ENST00000505348 785 ntBASIC3.08□□□□□ -1.92
RETP07949 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.08□□□□□ -1.92
RETP07949 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.08□□□□□ -1.92
RETP07949 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.08□□□□□ -1.92
RETP07949 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.08□□□□□ -1.92
RETP07949 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.08□□□□□ -1.92
RETP07949 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.08□□□□□ -1.92
RETP07949 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.08□□□□□ -1.92
RETP07949 HMGB1P6-201ENST00000569046 646 ntBASIC3.08□□□□□ -1.92
RETP07949 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.08□□□□□ -1.92
RETP07949 ATP1B3P1-201ENST00000605365 821 ntBASIC3.08□□□□□ -1.92
RETP07949 AC112503.2-201ENST00000609005 552 ntBASIC3.08□□□□□ -1.92
RETP07949 uc_338.25-201ENST00000613756 156 ntBASIC3.08□□□□□ -1.92
RETP07949 MIR8084-201ENST00000614105 89 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms