Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RPS29P10-201ENST00000439197 166 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.62□□□□□ -1.67
CNOT4O95628 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.62□□□□□ -1.67
CNOT4O95628 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 DDX3P2-201ENST00000446138 111 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 KNOP1P3-201ENST00000446933 426 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.62□□□□□ -1.67
CNOT4O95628 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CNOT4O95628 HMGN2P26-201ENST00000463169 339 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.62□□□□□ -1.67
CNOT4O95628 RPS29P22-201ENST00000472363 168 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AL163973.1-201ENST00000484753 577 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AC093267.1-201ENST00000489176 961 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.62□□□□□ -1.67
CNOT4O95628 TXNP6-201ENST00000510190 310 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.62□□□□□ -1.67
CNOT4O95628 RNU6-1170P-201ENST00000515974 106 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.62□□□□□ -1.67
CNOT4O95628 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.62□□□□□ -1.67
CNOT4O95628 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.62□□□□□ -1.67
CNOT4O95628 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.62□□□□□ -1.67
CNOT4O95628 BNIP3P6-201ENST00000549284 499 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AL359219.2-201ENST00000555184 348 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.62□□□□□ -1.67
CNOT4O95628 MIR4660-201ENST00000583549 74 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AC008814.1-201ENST00000603797 406 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AC009318.4-201ENST00000620496 486 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AL353662.3-201ENST00000625131 237 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNOT4O95628 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CNOT4O95628 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNOT4O95628 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNOT4O95628 AC026951.1-201ENST00000559530 2459 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNOT4O95628 AL359893.1-201ENST00000447628 1580 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.61□□□□□ -1.67
CNOT4O95628 IQCB2P-201ENST00000401788 1633 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AC104623.2-202ENST00000623477 4002 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CNOT4O95628 SMG1P4-204ENST00000523028 4131 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.61□□□□□ -1.67
CNOT4O95628 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CNOT4O95628 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CNOT4O95628 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.61□□□□□ -1.67
CNOT4O95628 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNOT4O95628 Y_RNA.144-201ENST00000363521 113 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 Y_RNA.259-201ENST00000364619 101 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 RNA5SP90-201ENST00000364801 99 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 RNU6-996P-201ENST00000365438 107 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 RPL7P60-201ENST00000397636 735 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AL356421.1-201ENST00000403255 413 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.61□□□□□ -1.67
CNOT4O95628 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.61□□□□□ -1.67
CNOT4O95628 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNOT4O95628 USP9YP7-201ENST00000436723 430 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 RPL21P133-201ENST00000443666 476 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.61□□□□□ -1.67
CNOT4O95628 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.61□□□□□ -1.67
CNOT4O95628 USP9YP32-201ENST00000452432 430 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNOT4O95628 RN7SL189P-201ENST00000468631 289 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AC097484.1-201ENST00000471148 389 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AC006463.2-201ENST00000473326 348 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.61□□□□□ -1.67
CNOT4O95628 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.61□□□□□ -1.67
CNOT4O95628 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.61□□□□□ -1.67
CNOT4O95628 RPL23AP41-201ENST00000484754 458 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AC083982.1-201ENST00000485679 344 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 CEACAMP10-202ENST00000495431 496 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.61□□□□□ -1.67
CNOT4O95628 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.61□□□□□ -1.67
CNOT4O95628 OR51K1P-201ENST00000510214 950 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AC093677.1-201ENST00000514414 678 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 RNA5SP337-201ENST00000517007 109 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.61□□□□□ -1.67
CNOT4O95628 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.61□□□□□ -1.67
CNOT4O95628 AP000907.2-201ENST00000530827 353 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AP003385.6-201ENST00000531603 374 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.61□□□□□ -1.67
CNOT4O95628 MTCYBP13-201ENST00000578634 1093 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 MIR3934-201ENST00000579806 107 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.61□□□□□ -1.67
CNOT4O95628 AC040896.1-201ENST00000613819 479 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 AC010205.1-201ENST00000616668 449 ntBASIC4.61□□□□□ -1.67
CNOT4O95628 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CNOT4O95628 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CNOT4O95628 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.61□□□□□ -1.67
CNOT4O95628 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CNOT4O95628 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CNOT4O95628 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNOT4O95628 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNOT4O95628 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNOT4O95628 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.6□□□□□ -1.67
CNOT4O95628 AL450345.1-202ENST00000605741 3881 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.6□□□□□ -1.67
CNOT4O95628 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms